| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1030 |
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| Symbol | |
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| ID | 5197292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1147200 |
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| End bp | 1148156 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580576 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261535 |
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| Protein GI | 148553953 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.890944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0737373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGG AGACATATCG GCTGGACGGG CGGGTCATCC TGATCACCGG CGCCGGGCGC
GGCCTGGGCG AAAGCTATGC GCGCCACCTG GCCGATCTCG GCGCGCAGGT GATCGTCAAC
GATCTCGGCG CCGGCATGGC CGACGGCGAG GGCTCCCCCC TGCCCGCCCG CCGGGTGGCC
GAGGCGATCC GGGCTGCGGG CGGACGGGCG AGCGACGACA TGTCCGACAT CGCCAACCCG
CGCGAGGCCG AGGCGCTGGT CGAGCGGATC GTCGAGGTCC ATGGCCGGAT CGACGCGCTG
GTCAACAATG CCGGCAATTT CCTGCCGCCC GCGCCCTTCG CCGAAACCGC GCTGGCCGAT
TTCGAGCGGA CCTGGCGCAT CCATCTCGGC GGGACCTACA ATCTCTGTCG CGCGGCGCTG
CCGCACATGA CGGGACAGGG CTTCGGCCGG ATCGTCAACA CCATCTCGAC CCAGGGCCTC
TACGGCGGGG TGGGCACCGC CGCCTATGCC AGCGCCAAGG CGGCGGTCCA GGGGCTCACC
GCCTCGCTCG CGGCCGATCA TCGCGGGAGC GACGTCCGGA TCAACGCGAT CAGCCCCGGC
GCCTTCACCC GCATGGTCGA CGCCGGGGAA CGGCCAGCCG CCTTCACCGA GGCGTTGAAG
CGCAACCTGC CGGCCGATCT CGTCGCCCCG GCGGTCGCCT GGCTCTGCCA TCCCGGCTGC
GCCGAGAACG GCGCGCTGAT CCAGGCGATG TCGGGCTGGT TCAGCCGCAC GATCATCGGC
GACCTCGACG GCTTCTGGGA CTTCGCGCCC AGCATCGATT CGGTCGCCCG CGGGCTCGCC
GCCCTACCCG CCACGGGCCC GGTCCGCGCC GCCGACAGCT CGGCCGCGCA CGCCCAGTCG
ATCATCGCCC GCGCCGAAGC CGCGCGCGCC CACAGCCAGG AGAAGAAGAT ATCATGA
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| Protein sequence | MAAETYRLDG RVILITGAGR GLGESYARHL ADLGAQVIVN DLGAGMADGE GSPLPARRVA
EAIRAAGGRA SDDMSDIANP REAEALVERI VEVHGRIDAL VNNAGNFLPP APFAETALAD
FERTWRIHLG GTYNLCRAAL PHMTGQGFGR IVNTISTQGL YGGVGTAAYA SAKAAVQGLT
ASLAADHRGS DVRINAISPG AFTRMVDAGE RPAAFTEALK RNLPADLVAP AVAWLCHPGC
AENGALIQAM SGWFSRTIIG DLDGFWDFAP SIDSVARGLA ALPATGPVRA ADSSAAHAQS
IIARAEAARA HSQEKKIS
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