Gene Swit_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1018 
Symbol 
ID5197265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1133809 
End bp1134612 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID640580564 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001261523 
Protein GI148553941 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATA ATCATTCTGT CCAAGCCGAG GGGAAGACGG TGTTCAACGA GCATTTCCAC 
GACGACGGCA CCCTGGAGCT GGTCGTCGAC AAGCCGCCGG TCAACGCCTT CAGCATCGGC
CTGCTGCACG ATCTCGCCGC CCGAATCGAA GGGGTGAAGG ACCGGCCCGA GGTGCGGGCC
GTGGTGCTGC GCGCCGACGG GCGCGGCTTC TGCGGCGGCG GCGACGTCAA GGAGGTCGAG
GCGCTGCCGG GGTTCGAGGG CATTCTCGGC CAGTCGTCGG GATCGATGCG GCTCAGTCTC
GCGGTGCTGC ACTGCGCGGT GCCGGTGGTG TGCGGCGTCC ATGCCTATTG CGTCGGCGCG
GGGGTGCTGA TCGCCGGGTC GGCGGACGTG CTGGTCGCGT CGCGCGACAC CCGTTTCGTG
CTGGCGGAGA TCGACAATGG CGCGACCGCC GGCGCGGTCC AGGCGCTGCG GCTGATGCCC
GAGAAGCGGG TGCGCGCGGC GATGATGACC GCCGATCCGG TGCTGGCGCA GGAACTGCAC
GAGCTGGGCT CGATCTACAC GCTGGTCGAC ACGCATGACG AGGTCGCCGC GGCCGCGCGC
GCCATCGCCG CGAAGATCGC CGCCAAGAGC CCGGAGGCGA TGCGGCGGCT GAAGCTGTCG
CTCAACAACA GCACCAAGGC GCACGAGCTG ATGGCCGCCT ATCGCGCCGA GATGAGCTAC
ACCTATGAGC TCAACATCAT GGGCGAGGCG AGCGCGGGCC GCACCGCCTT CATCGAGGGG
CGACGGGAAA GCTACAACCG GTAG
 
Protein sequence
MLDNHSVQAE GKTVFNEHFH DDGTLELVVD KPPVNAFSIG LLHDLAARIE GVKDRPEVRA 
VVLRADGRGF CGGGDVKEVE ALPGFEGILG QSSGSMRLSL AVLHCAVPVV CGVHAYCVGA
GVLIAGSADV LVASRDTRFV LAEIDNGATA GAVQALRLMP EKRVRAAMMT ADPVLAQELH
ELGSIYTLVD THDEVAAAAR AIAAKIAAKS PEAMRRLKLS LNNSTKAHEL MAAYRAEMSY
TYELNIMGEA SAGRTAFIEG RRESYNR