Gene Swit_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0998 
Symbol 
ID5200204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1109887 
End bp1110204 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content71% 
IMG OID640580544 
Productferredoxin 
Protein accessionYP_001261503 
Protein GI148553921 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.16414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.2542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCA GCTATCTCGA TCAGGACGGC ACCCGGACCG ACCTCGACGC CGGCGAGGGC 
ACCAACCTGA TGGAACTGGC GGTGCGGGGC GGCGTCACCA CGATCGAGGG CGAGTGCGGC
GGCGCGCTCG CCTGCGCCAC CTGCCACGTC CATATCCCCG ACGAGTGGCG CGGCGTGACC
GGCGAGCCGT CCGACGACGA GCGCGAGATG CTCGAGTTCG GCGTCGGCGT CGACGAGCGC
AGCCGGCTGT GCTGCCAGAT CCGCGTCACC GCGGCGATGG ACGGGCTGGT CGTGCTGACG
CCGGCCAGCC AGCGATAG
 
Protein sequence
MKISYLDQDG TRTDLDAGEG TNLMELAVRG GVTTIEGECG GALACATCHV HIPDEWRGVT 
GEPSDDEREM LEFGVGVDER SRLCCQIRVT AAMDGLVVLT PASQR