Gene Swit_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0993 
Symbol 
ID5200020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1105180 
End bp1106475 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content73% 
IMG OID640580539 
Producthypothetical protein 
Protein accessionYP_001261498 
Protein GI148553916 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.323587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.19287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTG ACTTCTCGCC CGAACAGCTC GCCGATCCGG CGACGGCGGT CGCCGAGGCG 
GTGATCCGCA AATGCGTCCA TTGCGGCTTC TGCACCGCGA CCTGTCCGAC CTATGTGCTG
CTCGGCGACG AGCTCGATAG CCCGCGCGGC CGCATCTACC TGATCCAGAA CATGCTGGAG
AAGGAGGCCG AGCCGACGCC CCAGGTGGTG CGCCATGTCG ACCGCTGCCT GTCCTGCCTG
TCGTGCATGA CGACCTGCCC GTCGGGCGTG AACTACATGC ACCTGGTCGA CCATGCCCGC
GCCTATATCG AGCGGCGCTA TCGCCGTCCG CTGGCCGAGC GGCTGATCCG CAATCTGCTC
GCGGCGGTGC TGCCCTATCC CGGCCGCTTC CGCCTCGCCC TCGCGCTCGC CCGGCTCGCC
CGCCCGACCG CGCCGCTGCT CGCCCGGATC GGCTGGGCCC GGCCGCTCGC CGCGATGCTC
CGCCTCGCCC CACGCCACGG CAGCGGGGCC GCGACCCGCG ACACGCCGCG CCCGGCCGCC
CCGGTCGGCC GCGTCGCGCT GCTCCAGGGC TGCGCCGAGC CGGTGCTCAA GCCCGAGGTC
CGCGCCGCGA CGATCCGGCT GCTCGGCCGG CTCGGCTATC AGGCGGTGCT GGCGCCCGGC
GAGGGCTGCT GCGGCGCGCT GGTCCACCAT ATGGGCCGCG AGGAGGCCGC GCGCGACGCC
GCCCGGCGCA ACGTCGACGC CTGGAGCCGC CAGATCGACG AGGCCGGCGG GCTCGACGCG
ATCCTGATCA CCGCGTCGGG CTGCGGCACG ACGATCAAGG ACTATGGCTT CCTGCTGCGC
GACGACCCGG CCTATGCCGA CCGCGCCGCG CGAGTCTCGG CGCTGGCGAA GGACGTCAGC
GAGTTCCTCG ACACGATCGA CCTGCCGGCC GGCGACGGGC GCGGGCTGAC CGTCGCCTAT
CACCCCGCCT GCTCGCTCCA GCACGGCCAG AAGATCACCG AGGCGCCGAA GCGCCTGCTC
GCCCGCATGG GCTATCGGGT GAAGACCCCG GCCGAGGCGC ATCTGTGCTG CGGTTCGGCG
GGGACCTACA ACATCCTCCA GCCCGAGCTG GCCGGGAAGC TCGGGGACCG CAAGGCCGCG
GCGATCGACC GGCTCGACGC CGACGTGATC GCCACCGGCA ATATCGGCTG CGCGATGCAG
ATCGGGATGC GCAGCGCGAC GCCGATCGCC CATGTCGTCG AACTGGTCGA CTGGGCCAGC
GGCGGCCCCG CCCCCGAAAG CCTCAGCCGC CGGTAG
 
Protein sequence
MRTDFSPEQL ADPATAVAEA VIRKCVHCGF CTATCPTYVL LGDELDSPRG RIYLIQNMLE 
KEAEPTPQVV RHVDRCLSCL SCMTTCPSGV NYMHLVDHAR AYIERRYRRP LAERLIRNLL
AAVLPYPGRF RLALALARLA RPTAPLLARI GWARPLAAML RLAPRHGSGA ATRDTPRPAA
PVGRVALLQG CAEPVLKPEV RAATIRLLGR LGYQAVLAPG EGCCGALVHH MGREEAARDA
ARRNVDAWSR QIDEAGGLDA ILITASGCGT TIKDYGFLLR DDPAYADRAA RVSALAKDVS
EFLDTIDLPA GDGRGLTVAY HPACSLQHGQ KITEAPKRLL ARMGYRVKTP AEAHLCCGSA
GTYNILQPEL AGKLGDRKAA AIDRLDADVI ATGNIGCAMQ IGMRSATPIA HVVELVDWAS
GGPAPESLSR R