Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0993 |
Symbol | |
ID | 5200020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1105180 |
End bp | 1106475 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640580539 |
Product | hypothetical protein |
Protein accession | YP_001261498 |
Protein GI | 148553916 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.323587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.19287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACTG ACTTCTCGCC CGAACAGCTC GCCGATCCGG CGACGGCGGT CGCCGAGGCG GTGATCCGCA AATGCGTCCA TTGCGGCTTC TGCACCGCGA CCTGTCCGAC CTATGTGCTG CTCGGCGACG AGCTCGATAG CCCGCGCGGC CGCATCTACC TGATCCAGAA CATGCTGGAG AAGGAGGCCG AGCCGACGCC CCAGGTGGTG CGCCATGTCG ACCGCTGCCT GTCCTGCCTG TCGTGCATGA CGACCTGCCC GTCGGGCGTG AACTACATGC ACCTGGTCGA CCATGCCCGC GCCTATATCG AGCGGCGCTA TCGCCGTCCG CTGGCCGAGC GGCTGATCCG CAATCTGCTC GCGGCGGTGC TGCCCTATCC CGGCCGCTTC CGCCTCGCCC TCGCGCTCGC CCGGCTCGCC CGCCCGACCG CGCCGCTGCT CGCCCGGATC GGCTGGGCCC GGCCGCTCGC CGCGATGCTC CGCCTCGCCC CACGCCACGG CAGCGGGGCC GCGACCCGCG ACACGCCGCG CCCGGCCGCC CCGGTCGGCC GCGTCGCGCT GCTCCAGGGC TGCGCCGAGC CGGTGCTCAA GCCCGAGGTC CGCGCCGCGA CGATCCGGCT GCTCGGCCGG CTCGGCTATC AGGCGGTGCT GGCGCCCGGC GAGGGCTGCT GCGGCGCGCT GGTCCACCAT ATGGGCCGCG AGGAGGCCGC GCGCGACGCC GCCCGGCGCA ACGTCGACGC CTGGAGCCGC CAGATCGACG AGGCCGGCGG GCTCGACGCG ATCCTGATCA CCGCGTCGGG CTGCGGCACG ACGATCAAGG ACTATGGCTT CCTGCTGCGC GACGACCCGG CCTATGCCGA CCGCGCCGCG CGAGTCTCGG CGCTGGCGAA GGACGTCAGC GAGTTCCTCG ACACGATCGA CCTGCCGGCC GGCGACGGGC GCGGGCTGAC CGTCGCCTAT CACCCCGCCT GCTCGCTCCA GCACGGCCAG AAGATCACCG AGGCGCCGAA GCGCCTGCTC GCCCGCATGG GCTATCGGGT GAAGACCCCG GCCGAGGCGC ATCTGTGCTG CGGTTCGGCG GGGACCTACA ACATCCTCCA GCCCGAGCTG GCCGGGAAGC TCGGGGACCG CAAGGCCGCG GCGATCGACC GGCTCGACGC CGACGTGATC GCCACCGGCA ATATCGGCTG CGCGATGCAG ATCGGGATGC GCAGCGCGAC GCCGATCGCC CATGTCGTCG AACTGGTCGA CTGGGCCAGC GGCGGCCCCG CCCCCGAAAG CCTCAGCCGC CGGTAG
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Protein sequence | MRTDFSPEQL ADPATAVAEA VIRKCVHCGF CTATCPTYVL LGDELDSPRG RIYLIQNMLE KEAEPTPQVV RHVDRCLSCL SCMTTCPSGV NYMHLVDHAR AYIERRYRRP LAERLIRNLL AAVLPYPGRF RLALALARLA RPTAPLLARI GWARPLAAML RLAPRHGSGA ATRDTPRPAA PVGRVALLQG CAEPVLKPEV RAATIRLLGR LGYQAVLAPG EGCCGALVHH MGREEAARDA ARRNVDAWSR QIDEAGGLDA ILITASGCGT TIKDYGFLLR DDPAYADRAA RVSALAKDVS EFLDTIDLPA GDGRGLTVAY HPACSLQHGQ KITEAPKRLL ARMGYRVKTP AEAHLCCGSA GTYNILQPEL AGKLGDRKAA AIDRLDADVI ATGNIGCAMQ IGMRSATPIA HVVELVDWAS GGPAPESLSR R
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