Gene Swit_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0988 
Symbol 
ID5199733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1097469 
End bp1098500 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID640580534 
Productphenylacetaldoxime dehydratase 
Protein accessionYP_001261493 
Protein GI148553911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.814886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.662912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCGT CGATCACACC GCACCTCGCC TGTCCGCGCT CGCGCCCGCG GCGGATCGCC 
GACGATTATG CCCCGCCCTA TCCCGCCTGG TCGGCGCGGA TCGATCCCGC GATCGGGCAG
GTGGTGATGG CGAGCTATGG CGTGCAAGGA CGAGAATCCG GCGACGTCGC CGCCGCGCTG
GCGCATGTCC GCGCCCTGCG CGCGACGCTC GATGCCGATG TCCGCCATGT CGACCTCGCC
CGCTATGTCG ACGAGGCCGG TTACGACACG CTCGTCCTCC AGCCCTATTG GACCGATCCC
GAAGCCTTCC GTCGCTGGGA AGCGCGCGCC GACGTCGCCG CGCTCCTCGC CGCCGAGACC
GGCCTCGGCC ATTTCCGCGA GATACTGACG CCGACGGTCG AGCGGCTGGA GACGCTCTAC
AGCACCGAGG ACGAGATGGA GGGCCTCGGC CGCGCGCTCG AACGGCGCAG CCCGCCGGTG
CAGGAACATG CCTATTGGGG CTCGGCGCGC GACCGTTTCC CGATCGCCCA GACCGACGCG
CTGGAGCCGG CCGGCCAGCT CGGCTTCGCG GCCGACGGCG CCGGCCGCGT CACGGTGCGC
GGCCACGACA ATATCGCGAT CATCCGCTCG GGCCAGGACT GGGGCCCGAC CGGCGGCGAG
GAACGTCGCC TCTACCTCGC CGAGATCGAG CCGGTGCTGC GCGCGGGCAT GGATTTCCTG
CGCGACCGGG GCGGCGAATG CGGCTGCTAC CTCAACCGCT ACATGCGGAT CGTCGACATG
GACGGCGCGC CGCAGGAGAA GAGCTTCGGC TGGAGCTACT GGCGCTCGCT CGGCGACATG
GAGAACTGGT CGGAGGCGCA CCCCTCGCAC CTCGCCATCT TCGGCACCTT CATGCGGATC
GTGCAGCAGC TCAACTTCGA CCTGAAGCTG CGCCTGTGGC ACGAGGTCTA TGTCGTCACC
CCCGACCAGC AGCTCTACGA CTATCGCAAC TGCCACCCGG ACACCGGCTT CCTGAAACAG
ATGCCGCGCT GA
 
Protein sequence
MDSSITPHLA CPRSRPRRIA DDYAPPYPAW SARIDPAIGQ VVMASYGVQG RESGDVAAAL 
AHVRALRATL DADVRHVDLA RYVDEAGYDT LVLQPYWTDP EAFRRWEARA DVAALLAAET
GLGHFREILT PTVERLETLY STEDEMEGLG RALERRSPPV QEHAYWGSAR DRFPIAQTDA
LEPAGQLGFA ADGAGRVTVR GHDNIAIIRS GQDWGPTGGE ERRLYLAEIE PVLRAGMDFL
RDRGGECGCY LNRYMRIVDM DGAPQEKSFG WSYWRSLGDM ENWSEAHPSH LAIFGTFMRI
VQQLNFDLKL RLWHEVYVVT PDQQLYDYRN CHPDTGFLKQ MPR