| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0901 |
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| Symbol | |
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| ID | 5200542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 992465 |
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| End bp | 993055 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640580447 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_001261406 |
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| Protein GI | 148553824 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0265599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.076763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACAATC GACGCCTGCC TGTCATCGTC GGCATTTCCG GAGCGACCGG GAGCATCTAT
GCCGTCCGTC TCCTCGAGCG GCTCAAGTCT CTCGATGTCG AGACGCATCT GGTGGCTTCG
AAGGCCGCGG AGATCACCCT CCGGCACGAA ATGGGGCTTA CCCTCAAGGA TCTTCGCCAG
CTCGCCGGCA CCTCCTATCC GATCGGCGAC ATCGGGGCCG CCATTGCCAG CGGATCGTTC
GAAACGGCCG GCATGATCGT CGCGCCCTGC GCCATTCGAA CGATGGCGGC CGTCGCGCAC
GGCCTTTCGG ACAACCTCCT GACGCGGGCC GCGGACGTGA CCCTGAAGGA ACGCCGCCGG
CTGATCCTGA TGCTGCGCGA AACACCGCTC AGCCTGATCC ATATCAACGC GATGAAGGCG
ATAACCGAAG CCGGCGGCAT CATCGCGCCG CCGGTGCCCG CCTTCTACAT CAAGCCGACG
TCGATCGACG ACATCGTCGA TCACACCGTT GCGCGCATGA TCGATCTCCT GGGCATCAAT
GCGGATCACG ACGTCAAGCG CTGGAAGGGG CTGCGGGACT CGACGGCATG A
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| Protein sequence | MNNRRLPVIV GISGATGSIY AVRLLERLKS LDVETHLVAS KAAEITLRHE MGLTLKDLRQ
LAGTSYPIGD IGAAIASGSF ETAGMIVAPC AIRTMAAVAH GLSDNLLTRA ADVTLKERRR
LILMLRETPL SLIHINAMKA ITEAGGIIAP PVPAFYIKPT SIDDIVDHTV ARMIDLLGIN
ADHDVKRWKG LRDSTA
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