| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0871 |
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| Symbol | |
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| ID | 5197170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 964632 |
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| End bp | 965348 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580416 |
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| Product | extensin family protein |
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| Protein accession | YP_001261376 |
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| Protein GI | 148553794 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.122985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.245287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGG CTGACTATGG TGGCGGTGTG TCGTCCTTCG TCCCCGCCGG CCATCGCCGC
CGCCCCCCCC TTCGCCGCCA CCGGCTCCTG CCCGGCCTTC TCGTCGTCCT GGTCGCGCTG
GCCGGGTGCA TCCCCTCGCC GCGCGCGCCG CGCCGCGGCT GGACGCCACC GGTCGAGACG
CCCGAGCGTT TCCGCCAGTG CGTCGCGGCG CTGCGGGCCG AGGGCGCGCA GGTCGAGGCG
CTGCCCGACC GCCGCTTCGA CAATGGCTGT TCGGCCACCT CCGCGGTCAA GCTGGTCGCG
GTCGGCATTC CGGTGACCAA TCTCGGCGCG GTCAAATGCG GAGCCGCCCT GCCCTTCGTC
CGCTGGGTGC GGCAGGACGT GCCGACCCTG GCGCAGCGCT GGCTGGGTTC GGACGTCGTC
CGGATCGAGA GCTTCGGCAG CTTCGCCTGC CGGCCGGTCA ACAACCAGGC CGGCAACCGC
CTGTCCGAAC ATGGCCGCGC CAATGCCATC GACATCGCCG CCTTCCGCCT CCGCGACGGT
CGGCGGATCA GCGTCAAGGA CGGCTGGAAC GGCGACGACC AGCAGATACG CGGATTCCTC
CGCGCGCTCC ACAAGGCCGC GTGCGGGCGC TTCTCGGTCG TGCTCGGGCC CGACGCCAAC
GCGCTCCACC ACGACCATTT CCATTTCGAT ATGGGCAGCG GTCCCTATTG CCGATAG
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| Protein sequence | MNAADYGGGV SSFVPAGHRR RPPLRRHRLL PGLLVVLVAL AGCIPSPRAP RRGWTPPVET
PERFRQCVAA LRAEGAQVEA LPDRRFDNGC SATSAVKLVA VGIPVTNLGA VKCGAALPFV
RWVRQDVPTL AQRWLGSDVV RIESFGSFAC RPVNNQAGNR LSEHGRANAI DIAAFRLRDG
RRISVKDGWN GDDQQIRGFL RALHKAACGR FSVVLGPDAN ALHHDHFHFD MGSGPYCR
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