Gene Swit_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0809 
Symbol 
ID5196762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp899499 
End bp899846 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content70% 
IMG OID640580353 
Productendoribonuclease L-PSP 
Protein accessionYP_001261314 
Protein GI148553732 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG AACGCATCGA CCAGGGCCCC CGGATGAGCC AGGCCGTGGT CCATGGCGAC 
ACCGTCTACC TGGCCGGCCA GGTCGGCGCG CCGGGCGCGA GCGTGACCGA GCAGACCAGG
ACAGTGCTGG CCCAGGTCGA AAGCCTGCTC GCGCGCACCG GGAGCAGCAA GAACCACCTG
CTGAACGCGA CGATCTGGCT GGCGGACATG GCCGACTTCG CCGAGATGAA CGCCGTCTGG
GACGCCTGGA TCGCCGACGC CCCGGCCCCC GCCCGCGCCA CCGGCGAGGC GAAGCTCGCG
ACCCCCGACT ACAAGGTCGA GATCATCATC ATCGCCGCCA AGGCGTAA
 
Protein sequence
MTIERIDQGP RMSQAVVHGD TVYLAGQVGA PGASVTEQTR TVLAQVESLL ARTGSSKNHL 
LNATIWLADM ADFAEMNAVW DAWIADAPAP ARATGEAKLA TPDYKVEIII IAAKA