| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0769 |
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| Symbol | |
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| ID | 5198799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 851973 |
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| End bp | 853634 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580313 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001261274 |
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| Protein GI | 148553692 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGA ACACCTACGC CCGCCGCCTT CGCCGGCCTG AGTGGTTCCC GCTATTTGCC
CCTCCCCGCC CGCTGCCTAG CCTCGGCCCG GATCAACGAA GCGGGAGGAA GCGGGACGGT
GCGCCTGAAG GACAAGATCG CGATCGTCAC CGGCGGCGCG TCGGGCATCG GCCGGGCGAC
GGCGCTGACC TTCGCCCGCG AGGGCGCCCG CGTCGCCGTC GCCGACATCG ACGCGGCCGG
CGCCGCGCGC ACCGCCGCCC AGATCGGCGA GCAGGCGATG GCGATCGCCT TCGACGTCGC
CGACGAAGCC GCCTGGGCCG ACGCCGCGCG GCGCACGGTC GATCGCTTCG GCCGGCTCGA
CATCCTCGCC AATATCGCCG GGATCGGCTT TCCGGGCACG ATCCTCGACC TGACCATGGA
CCAGTGGAAC AGGATGATCG CGGTCAACCT GACCGGCGTC ATGCTCGGCT GCCAGGCGGC
GATCCGCGCG ATCACCGCCA GCGGCGGCAG CGGCGCGATC GTCAACGTCT CCTCGCTCGC
CGGGCTGGTC GGCATCTCCG ACGTCGCCGG CTATTGCGGG TCGAAGGGCG GCGTGACGAC
GCTCAGCAAG TCGGTCGCGC TGTTCTGCGC CGAGCGCGGC CTGCCGATCC GCTGCGTCTC
GGTCCATCCC ACCTATGTCG ACAGCGAGAT GCTCGATCCG ATCGCCGATG CGGTCGGCGG
ACGGCAGGCG ATGGTCGACG CGATGGCGCG GCTGGTGCCG ATCGGCCGGA TCGCGACGCC
GCAGGACATC GCCAACGCCA TCCTCTTCGC GGCCTCCGAC GAAGCTGCGA TGATGAGCGG
GCATGCGCTG GTCATCGACG GGGCCCAGTT GGCGGGCCCC ACCAGCGCCC ATTCGAAAGG
CTGAACATGA GCGGACGGGT TTCGGGCAAG GTCATCATCG TCACGGGCGC GGCCGCCGGG
CTGGGCGCGG CGATCGCGCG GCGGCTGGCC GAGGAAGGCG CCACCGTCGT CCGCACCGAC
ATAGCGGGCG GCGACGGCGT GATCCGCCAG GACGTGACCG ACGAGGGCCA GTGGCAGGCG
CTGATCGCCG ACGTCGCCGC GACGCACGGC CGGCTCGACG GCCTCGTCAA CAATGCCGGC
ATCGCCGACG GCAAGGGCCC GCCCGATCCG GAGGGCGCGC TGGCCGAGGA TTGGCGCCGC
ATCTACACGG TCAATGTCGA GGGCGTGTTC CTCGGCTGCA AGCATGCGAT CCCCGCCATC
GCGGCGGCCG GCGGCGGCGC GATCGTCAAC ATGTCGTCGA TCGGCGCGCT GGTGCCGACG
CCCTTCCTGT CGGCCTATGG CGCGTCGAAG GCGGCGGTGA TGCAGTTCAC CCGGTCGGTC
GCGCTCCATT GCTGCGAGCA GGGCCATGCG ATCCGCTGCA ACAGCGTCCA TCCCGGCCAG
GTCCGCACCC CGATGCACGA CGAGCTGATC GCGCGCACCG CGGCCGAGCA CGGCCTCGAC
GAGGCGCAGG CGGCCGAGGC CTTCCTGTCC AAGGTGCCGA TGAAGAAATG GCAGGAGGCC
GTCGACATCG CCAACGGCGT GCTCTTCCTG ATGTCCGACG AAGCCCGCTT CGTCACCGGC
ACCTCGCTGG TGGTCGACGG CGGCATGAGC CTCACCAACT AG
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| Protein sequence | MTGNTYARRL RRPEWFPLFA PPRPLPSLGP DQRSGRKRDG APEGQDRDRH RRRVGHRPGD
GADLRPRGRP RRRRRHRRGR RRAHRRPDRR AGDGDRLRRR RRSRLGRRRA AHGRSLRPAR
HPRQYRRDRL SGHDPRPDHG PVEQDDRGQP DRRHARLPGG DPRDHRQRRQ RRDRQRLLAR
RAGRHLRRRR LLRVEGRRDD AQQVGRAVLR RARPADPLRL GPSHLCRQRD ARSDRRCGRR
TAGDGRRDGA AGADRPDRDA AGHRQRHPLR GLRRSCDDER ACAGHRRGPV GGPHQRPFER
LNMSGRVSGK VIIVTGAAAG LGAAIARRLA EEGATVVRTD IAGGDGVIRQ DVTDEGQWQA
LIADVAATHG RLDGLVNNAG IADGKGPPDP EGALAEDWRR IYTVNVEGVF LGCKHAIPAI
AAAGGGAIVN MSSIGALVPT PFLSAYGASK AAVMQFTRSV ALHCCEQGHA IRCNSVHPGQ
VRTPMHDELI ARTAAEHGLD EAQAAEAFLS KVPMKKWQEA VDIANGVLFL MSDEARFVTG
TSLVVDGGMS LTN
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