Gene Swit_0764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0764 
Symbol 
ID5199098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp845374 
End bp845844 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID640580308 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001261269 
Protein GI148553687 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.267919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.248385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA AAGTTCAGCT CGATTCGATC GACCGCAAGC TGCTCCGGGT GCTGCAGCGC 
CGCGCCGACA TCAGCCAGGC GGCGCTGGCC GAAGAGGTGG GGTCCTCCCC CGCATCATGC
TGGCGCCGGC TGAAGGCGCT GGAGGAGGCC GGTGTGCTCG GCCCGACCGT CCGGCTGCTC
AACCCGCAGG CGATCGGCAA GACGCTCGAC GTGGTCTGCC AGGTGCGGAT GAAGGCGCAC
GACGTCGAGA GCCGGTCGGC GTTCGAATCC TTCATCGTCG GCCGCGAGGA GGTGATGGAA
TGCCTCTCCA TGTCCGGAGA GTGGGACTAT CAGATCCGCG TCACCGTCAG CGACATGGCG
GAATATGAGG ATTTCCTGAT GCGCCGCCTG CTCGCCCAGC CGGCGGTGGC GCATTCGGCG
TCGCACTTCG CGCTCAAGCG CATCAAGTCG ACCACCGCGA TCGCGGTGTG A
 
Protein sequence
MMEKVQLDSI DRKLLRVLQR RADISQAALA EEVGSSPASC WRRLKALEEA GVLGPTVRLL 
NPQAIGKTLD VVCQVRMKAH DVESRSAFES FIVGREEVME CLSMSGEWDY QIRVTVSDMA
EYEDFLMRRL LAQPAVAHSA SHFALKRIKS TTAIAV