| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0754 |
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| Symbol | paaB |
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| ID | 5197788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 835339 |
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| End bp | 835623 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580298 |
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| Product | phenylacetate-CoA oxygenase subunit PaaB |
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| Protein accession | YP_001261259 |
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| Protein GI | 148553677 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
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| TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.933825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.424699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGG ATTGGCCGCT CTGGGAAGTG TTCGTCCGCG CCCGCGGCGG GCTCGACCAT
CGCCATGTCG GTTCGGTGCA TGCGCCGGAC GCGGAGATGG CGCTGCGCCA CGCGCGCGAC
ACCTATACCC GCCGCATGGA AGGCGTGAGC CTGTGGGTCG TCAAGTCGAC CGACATCGCC
GCGTCGGACC CCGACCAGTC GGGCGAGTTG TTCGAGCCGG CGCAGACCAA GATCTACCGG
CATCCGACCT TCTACGAGCT GCCCGACGCC GTGAAGCACA TGTGA
|
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| Protein sequence | MSKDWPLWEV FVRARGGLDH RHVGSVHAPD AEMALRHARD TYTRRMEGVS LWVVKSTDIA
ASDPDQSGEL FEPAQTKIYR HPTFYELPDA VKHM
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