| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0689 |
|---|
| Symbol | |
|---|
| ID | 5200988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 754836 |
|---|
| End bp | 756215 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640580233 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001261194 |
|---|
| Protein GI | 148553612 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0866657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGGA AGATGCTCCT GCGCGGCGTC TGCGCGGCGG TCCTGCTGGC GGCGACGGCG
AGCCCGGCGA TGGCCGGAAG CTCGGCCGAG CTGCTCAAGC GGCTGCACGA GAAGGGGATT
TTGACCGACG ACGAATATCA GCAGCTGCTG AAGCAGGACG ACGCGCCGTC CGCCTCCGCC
GCTTCGGGGC CGTCCTGGGT CGACGACAAG TCGATCGTTC GTGTCAACGG CAGCGGCCTC
GGCCTCCAGG TCGGCGACAT CGCGCTCAAG ATCTCGGGAT CGGTCAACGG CTTCTACGTC
CACGACAATG GCGACAATCC CGGCCCGGCC AAGACCGTCG TCGGCGGGGT CGCGACGGTC
GGCTCCAACA GCTCGGCGAT CCGCAACGGC CTGCTGCCCG GCTTCCTGAA GATCGAGGCG
AGCACGACGT TGGACGGCTG GGACGTCGGT GCCCATTTCG GCATCTATCC CGGCATCAAC
TCGGTCAGCT ATGTCGGTGG CGGCGCCAAC AGCGGCGGCA ATCCCCGCGC GCTCCAGACC
AGCGGCATCG ACTTCCGCCA GACCTTCCTG ACCTTCGGCC GCAAGGGCTT CGGCGAGGTG
AAGATCGGCC GCGACATCGG CCTGTACGGG TCCGAACAGA TCCTCAACGA CATCACCCTG
CTGTCGTCGG GCACCCCGGC GGGCAACGTC GCCCCGTCGA ACACCACGCT GGGCCGGATC
GGCACCGGCT ATATCTACAC CGACTTCCAG CCGCAGATCA CCTACACCAC GCCCAGCCTG
GCCGGTTTCC AGGCGAGCGT CGGCATCTTC GAGCCGCTCA GCTCGCTGAC CGGCCCCGCC
GAATCGAACA AGCAGCCGGG CTTCCAGGCC AAGCTGGTCT ATGACGGCAA GCTGGGCGGG
GTCGCGACCC GGCTGTGGCT GGCCGGCATC ACCCAGAAGC ACAATGTCGT CGGCGGGCCC
GACTATACCG GCAGCGGCTT CGACACCGGC GCCAAGGTCA CGGTCGGTCC GGTGACGCTG
GTCGGCACCT ATTATGACGG CTCGGGGCTC GGCACGACCG CGCTCAACCT GTTCGACACC
GACGGCCTCG GCAACAAGCG CGACAGCCAC GGCTTTTACC TGCAGGGCTT GGCGACCTTC
GGGAAGGTCT CGGTCGCGGG CAGCTATGGC GAGAGCAATC TCGACTATGC CAACCTCGCC
GATGCGGTCG CCAATCCGGC GCTGGTCGAC AAGAACAGCA GCTGGGTGGG GCAGGTGCGC
TACGGGCTGA ACGGCTGGGT CACGCTGATC AGCGAATATG TCCACACACG GTCGAAGGCG
CACAACGGCA ACAAGGCGTC GTCGAACGCG ATCGCCAGCG GCGCCATCCT GTTCTTCTGA
|
|---|
| Protein sequence | MGRKMLLRGV CAAVLLAATA SPAMAGSSAE LLKRLHEKGI LTDDEYQQLL KQDDAPSASA
ASGPSWVDDK SIVRVNGSGL GLQVGDIALK ISGSVNGFYV HDNGDNPGPA KTVVGGVATV
GSNSSAIRNG LLPGFLKIEA STTLDGWDVG AHFGIYPGIN SVSYVGGGAN SGGNPRALQT
SGIDFRQTFL TFGRKGFGEV KIGRDIGLYG SEQILNDITL LSSGTPAGNV APSNTTLGRI
GTGYIYTDFQ PQITYTTPSL AGFQASVGIF EPLSSLTGPA ESNKQPGFQA KLVYDGKLGG
VATRLWLAGI TQKHNVVGGP DYTGSGFDTG AKVTVGPVTL VGTYYDGSGL GTTALNLFDT
DGLGNKRDSH GFYLQGLATF GKVSVAGSYG ESNLDYANLA DAVANPALVD KNSSWVGQVR
YGLNGWVTLI SEYVHTRSKA HNGNKASSNA IASGAILFF
|
|---|
| |