| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0657 |
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| Symbol | |
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| ID | 5196192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 710992 |
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| End bp | 715521 |
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| Gene Length | 4530 bp |
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| Protein Length | 1509 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580201 |
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| Product | glutamate synthase (NADPH) large subunit |
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| Protein accession | YP_001261163 |
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| Protein GI | 148553581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0412975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTACG AGCATCTCAC CCCCGAACAT GAGCGCCTCG CCCGCGAGGG CATGTATCGC
CCCGACTATG AAGGCGACGC CTGCGGCGTC GGCCTCGTCG CGGCGACCGA CGGCAAGCCG
TCGCGCCGCG TCGTCGCCGC CGCGATCGAC GCGCTGAAGG CGGTGTGGCA CCGCGGCGCG
GTCGACGCCG ACGGCAAGAC CGGCGACGGC GCCGGCATCC ATGTCGACCT GCCGATCCGC
TTCTTCGACG ACGCGATCGA GCATGCCGGC CACAAGCCGC GCCCGAACCG CCTCGCGGTC
GGCATGGTGT TCCTGCCGCG CACCGACCTC GGCGCGCAGG AGACCTGCCG CACGATCGTC
GAGAGCGAGA TCATCGATTT CGGCTACACC ATCTATGGCT GGCGCCAGGT GCCGGTCGAC
GTGTCGGTGA TCGGCGAGAA GGCGCTGCAG ACCCGCCCCG AGATCGAGCA GATCATGATC
GCCGGGCCGA TGCCCGACGA GATGAGCCTC GAGGAGTTCG AGAAGAATCT CTACCTGATC
CGCCGCCGCA TCGAGCGCAA GGTGATCGAG GCGCAGATCC AGGGCTTCTA CATCTGCTCG
CTGTCGGCGC GCTCGATCGT CTACAAGGGG CTGTTCCTCG CCGAGGAGCT GTCGGTCTTC
TATCCCGACC TGAAGGACGA GCGCTTCGTC AGCCGGGTCG CGATCTTCCA CCAGCGCTAT
TCGACCAACA CCTTCCCGCA ATGGTGGCTG GCGCAGCCGT TCCGGTCGCT CGCGCACAAT
GGCGAGATCA ACACGATCCG CGGCAACAAG AACTGGATGA AGAGCCACGA GATCAAGATG
GCCAGCCTCG CCTTCGGCGA GCATTCGGAC GAGATCAAGC CGCTGATCCC GGCGGGCGCC
TCCGACACGG CGGCGCTCGA TGCCGTGTTC GAGACGATCT GCCGCTCGGG CCGCGACGCG
CCGACCGCGA AGCTGATGCT GGTGCCCGAG GCGTGGCAGC ACAGCGCCGA CGTGCCCGAG
GCGCGCCGGG CGATGTACAG CTATATCGGA TCGGTGATGG AGCCGTGGGA CGGCCCCGCC
GCGCTGGCGA TGACCGACGG CCGCTGGGCG GTGGCCGGCG TCGACCGCAA CGCGCTGCGG
CCGCTGCGCA CCACGCGGAC CGCCGACAAC CTGCTGATCG TCGGGTCGGA GACCGGCATG
GTCGTCGTCC CCGAGAGCAC GATCATCGCC AAGGGCCGGA TGGGGCCGGG CCAGATGATC
GCGATCGACC TCGACGAGGG GCGGATCTAC GGCGACGCCG AGATCAAGGA CAAGATCGCC
GCCGAGAAGC CCTATGGCGA GTGGGTCAGG AACTTCCGTA CCCCGGCCGA CCTGCCGCGC
CCGGCGGAGG ACATGATCCC GCGCTGGCCG CGCGCCGAGC TGCTGCGCCG CCAGGTCGCG
GCCGGGCAGA CGCTGGAGGA CATGGAGCTG ATCCTCAGCC CGCAGGTCGA GGACGCCAAG
GAGGCGGTCG GATCGATGGG CGACGACACG CCGCTCGCGG TCATCTCCGA CAATGGCCGG
CTGATCAGCC ATTTCTTCCG GCAGAATTTC AGCCAGGTCA CCAACCCGCC GATCGACAGC
CTGCGCGAGA CGCAGGTGAT GAGCCTCAAG ACGCGCTTCG GCAACCTCGC CAACATCCTC
GACAATGAGG GGCAGCAGGC CGACGTGCTG GTGCTCGAAA GCCCGGTGCT CCACTGCCGC
GACTGGCGGA TGCTGAAGGA TCATTTCGGC GCCCAGGCGG CCGAGATCGA CTGCACCTTC
GACGTCCATG GCGGGCCCGA CGCGCTGCGC CAGGCGATCG CCCGCGTCCG CGCCGAGGCC
GAGACCGCGG TGCGCGAGGG CAAGGCCGAG CTGTTCCTGA CCGACGAGCA TGTCGGGCCC
GACCGGGTCG GCATCGCGAT GATCCTGGCG GCGGCGGCGG TCCACACCCA CCTCGTCCGC
AAGGGGCTGC GCTCCTATGC GTCGGTCAAC GTCCGCTCGT CCGAATGCCT CGACACCCAT
TATTATGCGG TGCTGGTCGG CGTCGGCGCG ACGACGGTGA ACGCCTATCT GGCGGAGGCG
GCGATCGCCG ACCGCCATGC GCGCGGCCTG TTCGGCGAGC GCAGCCTCGA CGAATGCCTG
AAGCGGCACC GCAAGGCGAT CGACGACGGC CTGCTCAAGA TCATGTCGAA GATGGGGATC
GCGGTGATCT CCAGCTATCG CGGCGGCTAT AATTTCGAGG CGGTCGGCCT CAGCCGCGCG
CTGGTCAACG ACTTCTTCCC CGGCATGCCG GCGAAGATCT CGGGCGAGGG CTTCAACTCG
CTCCAGTTCA ACCTGATCGA GCGGCACGAG GCGGCGTTCG ACGACGTGGT CGTGTCGCTG
CCGGTCGGCG GCTTCTACAA GCAGCGCGCG GGCGGGGAGG CGCATGCCTA TTCGGCGCAG
CTCATGCACC TGCTGCAGAC CTCGGTCGCG ACCGACAGCT ATTCGACCTA TCTGCAATTC
TCGCGCGGGG TGCGGGACCT GCCGCCGGTC TATCTGCGCG ACCTGCTCGA GTTCAACTGG
GCGCGCGAGG GGATAGCGAT CGACTCGGTC GAGCCGATCA CCGAGATCCG CAAGCGCTTC
GTGACGCCGG GCATGTCGCT GGGCGCGCTC AGCCCGGAGG CGCACGAGAC GCTGGCGATC
GCGATGAACC GGATCGGCGC CAAGGCGGTG TCGGGCGAGG GCGGCGAGGA CCGGAGCCGC
TACACCCCCT ATGCGAACGG CGACAACGCC AATTCGGTGA TCAAGCAGGT CGCCTCGGGC
CGCTTCGGCG TCACCGCCGA ATATCTCGGC GCCGCCGAGG AGCTGGAGAT CAAGGTCGCG
CAGGGCGCCA AGCCCGGCGA GGGCGGCCAG CTTCCCGGCT TCAAGGTGAC CGAGATGATC
GCGCGGCTGC GCCATTCGAC GCCGGGCGTG ACGCTGATCT CACCGCCGCC GCACCACGAC
ATCTACTCGA TCGAGGATCT GGCGCAGCTC ATCTACGACC TGAAGCAGAT CAATCCGAGC
GCGCGGGTGT GCGTGAAGCT GGTCAGCTCG GCCGGCATCG GCACGGTCGC GGCGGGCGTC
GCCAAGGCGC ATGCGGACGT CATCCTGGTC GCCGGCCATG TCGGCGGCAC CGGCGCGTCG
CCGCAGACCT CGGTCAAATA TGCCGGCACG CCGTGGGAGA TGGGGCTGAG CGAGACCAAC
CAGGTGCTGA CGCTCAATGG CCTGCGCCAC CGGGTCAAGC TGCGCACCGA CGGCGGCCTC
AAGACCGGGC GCGACATCGT CGTCGCCGCG ATCCTGGGCG CGGAGGAGTT CGGCATCGGC
ACGCTGTCGC TGGTCGCGAT GGGCTGCATC ATGGTGCGCC AGTGCCATTC GAACACCTGC
CCCGTCGGCG TCTGCACCCA GGACGAGGCG CTCCGGAAGA AGTTCGTCGG CACGCCGGAG
AAGGTGATCA ACCTGATGAC CTTCATCGCC GAGGAGGTGC GCGAGATCCT CGCCAAGCTC
GGCGTCCGCT CACTGGACGA GATCATCGGC CGCACCGAGC TGCTCCGCCA GGTCAGCCGC
GGCGCCGAGC ATCTCGACGA TCTCGACCTC AACCCGGTGC TCGCCAAGGT CGACGCGCCC
GAGGAGAAGC GCCGCTTCAA CATCCCGACC TTCCGCAACG AGGTGCCCGA CAGCCTCGAC
GCGCAGATGA TCGAGGACGC CAAGGCGGTG TTCGAGCGGC GAGAGAAGAT GCAGCTCACC
TATACGGTGC GCAACACGCA CCGCGCGGTC GGCACGCGCT TCTCGGCGGA GATCACCAGG
CGTTACGGCA TGTCCTCGCT CGCCGACGGC CATGTCCATA TCCGCCTGCG CGGATCGGCC
GGCCAGTCGC TCGGCGCCTT CGCGGTCAAG GGCATCACGC TGGAGGTGTT CGGCGACGCC
AACGACTATG TCGGCAAGGG CCTGTCGGGC GCGATCATCG CGGTCCGCCC GATGGTGTCG
TCGCCGCTGG AGACGCGATC GAACACGATC ATCGGCAACA CCGTCCTCTA CGGCGCCACC
GCGGGCAAGC TGTTCGCGGC GGGGCAGGCC GGCGAGCGCT TCGCGGTCCG CAACTCGGGC
GCGACCGTGG TGGTCGAGGG CTGCGGCGCC AATGGCTGCG AATATATGAC CGGCGGCATC
GCGGTGATCC TCGGCCGGGT CGGCGCCAAT TTCGGCGCGG GCATGACCGG CGGCATGGCG
TTCGTGCTCG ACGAGCATGG CGATTTCGAG CGCAACGCCA ATCCGGACAG CATCGTCTGG
CAGCGGCTCG GCTCGGTCCG CTGGGAGATG CGCTGCAAGG CGCTGATCGC CGAACATGCC
GAGCGCACCG ACAGCAAATG GGCGCACAGC GTCCTCGACG ACTGGGATCG CTGGCGCGAC
CGCATCTGGC AGGTCTGCCC GAAGGAGATG GTCGACCGGC TCGACTATCC GCTCAGCGAC
AGCGAGGCGG AGATCGTCGC CGCCGAATAG
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| Protein sequence | MSYEHLTPEH ERLAREGMYR PDYEGDACGV GLVAATDGKP SRRVVAAAID ALKAVWHRGA
VDADGKTGDG AGIHVDLPIR FFDDAIEHAG HKPRPNRLAV GMVFLPRTDL GAQETCRTIV
ESEIIDFGYT IYGWRQVPVD VSVIGEKALQ TRPEIEQIMI AGPMPDEMSL EEFEKNLYLI
RRRIERKVIE AQIQGFYICS LSARSIVYKG LFLAEELSVF YPDLKDERFV SRVAIFHQRY
STNTFPQWWL AQPFRSLAHN GEINTIRGNK NWMKSHEIKM ASLAFGEHSD EIKPLIPAGA
SDTAALDAVF ETICRSGRDA PTAKLMLVPE AWQHSADVPE ARRAMYSYIG SVMEPWDGPA
ALAMTDGRWA VAGVDRNALR PLRTTRTADN LLIVGSETGM VVVPESTIIA KGRMGPGQMI
AIDLDEGRIY GDAEIKDKIA AEKPYGEWVR NFRTPADLPR PAEDMIPRWP RAELLRRQVA
AGQTLEDMEL ILSPQVEDAK EAVGSMGDDT PLAVISDNGR LISHFFRQNF SQVTNPPIDS
LRETQVMSLK TRFGNLANIL DNEGQQADVL VLESPVLHCR DWRMLKDHFG AQAAEIDCTF
DVHGGPDALR QAIARVRAEA ETAVREGKAE LFLTDEHVGP DRVGIAMILA AAAVHTHLVR
KGLRSYASVN VRSSECLDTH YYAVLVGVGA TTVNAYLAEA AIADRHARGL FGERSLDECL
KRHRKAIDDG LLKIMSKMGI AVISSYRGGY NFEAVGLSRA LVNDFFPGMP AKISGEGFNS
LQFNLIERHE AAFDDVVVSL PVGGFYKQRA GGEAHAYSAQ LMHLLQTSVA TDSYSTYLQF
SRGVRDLPPV YLRDLLEFNW AREGIAIDSV EPITEIRKRF VTPGMSLGAL SPEAHETLAI
AMNRIGAKAV SGEGGEDRSR YTPYANGDNA NSVIKQVASG RFGVTAEYLG AAEELEIKVA
QGAKPGEGGQ LPGFKVTEMI ARLRHSTPGV TLISPPPHHD IYSIEDLAQL IYDLKQINPS
ARVCVKLVSS AGIGTVAAGV AKAHADVILV AGHVGGTGAS PQTSVKYAGT PWEMGLSETN
QVLTLNGLRH RVKLRTDGGL KTGRDIVVAA ILGAEEFGIG TLSLVAMGCI MVRQCHSNTC
PVGVCTQDEA LRKKFVGTPE KVINLMTFIA EEVREILAKL GVRSLDEIIG RTELLRQVSR
GAEHLDDLDL NPVLAKVDAP EEKRRFNIPT FRNEVPDSLD AQMIEDAKAV FERREKMQLT
YTVRNTHRAV GTRFSAEITR RYGMSSLADG HVHIRLRGSA GQSLGAFAVK GITLEVFGDA
NDYVGKGLSG AIIAVRPMVS SPLETRSNTI IGNTVLYGAT AGKLFAAGQA GERFAVRNSG
ATVVVEGCGA NGCEYMTGGI AVILGRVGAN FGAGMTGGMA FVLDEHGDFE RNANPDSIVW
QRLGSVRWEM RCKALIAEHA ERTDSKWAHS VLDDWDRWRD RIWQVCPKEM VDRLDYPLSD
SEAEIVAAE
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