Gene Swit_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0625 
Symbol 
ID5197961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp678684 
End bp679037 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content71% 
IMG OID640580169 
ProductArsR family transcriptional regulator 
Protein accessionYP_001261131 
Protein GI148553549 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.906206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCATGT CGACGCTGGC GTCGATGGTT GAGACCGCCC GCGCGACCGA CCCGGCGCCG 
ATCTTCGCGG CGCTGGGGGA CCGCACCCGG CTGTCGCTGC TGATGCGGCT CAGCGACGGG
CGCACCCGCT CGATCACGAT GCTCGCCGCC GACACCGACC TGACCCGCCA GGCGGTGACC
AAGCATCTGC GGGTGTTGCA GGACGTCGGC CTGGTCGAGA GCCTCCGCCA TGGGCGGGAG
AGCCGCTACG CCTGTCGCCC CGAACCGCTC GATATGGCGC GCGCCTATCT CGACCGGGTT
GCGGCGCAGT GGGACGATGC GCTGCTGCGG CTCAAGGCGT TCGTCGAGGA GTAG
 
Protein sequence
MPMSTLASMV ETARATDPAP IFAALGDRTR LSLLMRLSDG RTRSITMLAA DTDLTRQAVT 
KHLRVLQDVG LVESLRHGRE SRYACRPEPL DMARAYLDRV AAQWDDALLR LKAFVEE