Gene Swit_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0620 
Symbol 
ID5199856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp673688 
End bp674242 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content66% 
IMG OID640580164 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001261126 
Protein GI148553544 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAATT CCGGCGGTAT TCAGGCTAGC CTCAGCGGAC GTTATGCGAC CGCGTTGTTC 
GGTCTCGCAC GGGACGAAAA GGCGATCGAC GCGGTCTCCG CGAGCCTTCA GTCGCTCAAG
GCCGCGCTGA CCGAATCGGA CGACTTCCGT CGGTTGACGA CGAGCCCGCT CGTTTCGCGC
GACGAGGCGA TGAAGGCGGT GGCCGCGACG GCCGCGAGCC TCGGCATCGA TCCCCTCACC
ACCAAGTTCC TCGGCGTGCT CGCGCAGAAT CGCCGCCTCG GCCAGCTCGG CGCGGTGATC
CGCTCCTTCG GGACGCTCTC GGCCCGACAC CGCGGCGAGA CCACTGCCGA GGTCACCTCG
GCCCACCCGC TGACCGCCAC CCAGGTCAAG GCCCTGAAGG CCAAGCTCAA GACCCAGCTC
GACCGCGACG TCGCAGTCGA TCTCACCGTC GATCCGTCCA TCCTCGGCGG CCTGATCGTC
AAGATCGGCT CGCGCCAGAT CGACGGTTCG ATCCGCTCCA AACTGAACTC CCTCGCGATT
GCGATGAAAG GCTGA
 
Protein sequence
MENSGGIQAS LSGRYATALF GLARDEKAID AVSASLQSLK AALTESDDFR RLTTSPLVSR 
DEAMKAVAAT AASLGIDPLT TKFLGVLAQN RRLGQLGAVI RSFGTLSARH RGETTAEVTS
AHPLTATQVK ALKAKLKTQL DRDVAVDLTV DPSILGGLIV KIGSRQIDGS IRSKLNSLAI
AMKG