Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0565 |
Symbol | |
ID | 5200753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 617245 |
End bp | 617565 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580108 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001261071 |
Protein GI | 148553489 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.226864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGTTG CCAGTGAACA GGAGGAAAGC GACGCGCGCC GCCACGGGCG CCATCGCATC ATGCTCGCCG CGACGCTCTA CTCGGTCCAC GGCGAATGCA ACGGCGTGCT GCTCGACCTG TCGCAGGGCG GCGCGATGGT CAGCGCCTCG CCACCACTTC CGGTCGGCTG CCGCCTGCTG CTCGAGCGCC AGAATTTCGA GGTTCCCGGC GTGGTCCGCT GGGTCGAGGG CAACCGCTTC GGCATCCAGT TCGAGGAACC CCTTGCCGAG GCCGTGATCA TGGGCCTGGT GTCGCGCAGC GCGCATCAGA ACGACCGCTG A
|
Protein sequence | MAVASEQEES DARRHGRHRI MLAATLYSVH GECNGVLLDL SQGGAMVSAS PPLPVGCRLL LERQNFEVPG VVRWVEGNRF GIQFEEPLAE AVIMGLVSRS AHQNDR
|
| |