Gene Swit_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0565 
Symbol 
ID5200753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp617245 
End bp617565 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content68% 
IMG OID640580108 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001261071 
Protein GI148553489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.226864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTG CCAGTGAACA GGAGGAAAGC GACGCGCGCC GCCACGGGCG CCATCGCATC 
ATGCTCGCCG CGACGCTCTA CTCGGTCCAC GGCGAATGCA ACGGCGTGCT GCTCGACCTG
TCGCAGGGCG GCGCGATGGT CAGCGCCTCG CCACCACTTC CGGTCGGCTG CCGCCTGCTG
CTCGAGCGCC AGAATTTCGA GGTTCCCGGC GTGGTCCGCT GGGTCGAGGG CAACCGCTTC
GGCATCCAGT TCGAGGAACC CCTTGCCGAG GCCGTGATCA TGGGCCTGGT GTCGCGCAGC
GCGCATCAGA ACGACCGCTG A
 
Protein sequence
MAVASEQEES DARRHGRHRI MLAATLYSVH GECNGVLLDL SQGGAMVSAS PPLPVGCRLL 
LERQNFEVPG VVRWVEGNRF GIQFEEPLAE AVIMGLVSRS AHQNDR