Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0543 |
Symbol | |
ID | 5200650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 597665 |
End bp | 598369 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580084 |
Product | hypothetical protein |
Protein accession | YP_001261049 |
Protein GI | 148553467 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGACGA TCCTGCTGTT TCTGCTGGTC GTCGCGGCGG CCGTCGTCGC GATACCGTTC ATTCCGCTCA AGACCGCGAT CGGCCTGATG CAGCTCGACC GCGTCGGCTT CGAGGCCGCG CAGGTCGAAG GCAATCTGTG GGAGGGGCAG CTCTACGACG CCCGGCTCGC CAAGATACAG CTCGGCGACG TGACGAGCCG GATGTCGCTC GCGGATGCCG CCAAGGGTCG TATCCGCCTC GACGTCGAGG GCACCGACGA GGTCTCGCGG CTGAAGGGCG TGTTCAGCTA CGGCCTCGGC GGCGCGGGGA TCGACGATTT CAGCGTCGGC ATGCCGGTGG TCGCGGGACC GCAGCCGATC GGCAACGTCA CCCTGATCGT CGATGCGCTC AAGGCGCGTT TCCCCGGCGG CGACTGCGAA GACGGTAGCG GCCAGGTCCG CGCCTATCTG TCCGGCGCGC TGCCGATGGT CGGCCTGCCC GGCGAGATGA GCGGCCCGGC GCTGTGCCGC GACGGCAAGC TCACCTTCGA CATGGCGAGC CCGAGCGGGC GCGAGCAGGA ACAGGTGACG ATCCTGTCGC CGACCAAGTT CAAGGTCCGC CTGTTCATCA AGCCGACCGC GCCGCGGGTC GAGCAGATAT TGCAGTCGCA CGGCTTCCAG CGCGCCGACG ACGGCTATGC CTATGAGGAG GAACGCTCGA TCTGA
|
Protein sequence | MRTILLFLLV VAAAVVAIPF IPLKTAIGLM QLDRVGFEAA QVEGNLWEGQ LYDARLAKIQ LGDVTSRMSL ADAAKGRIRL DVEGTDEVSR LKGVFSYGLG GAGIDDFSVG MPVVAGPQPI GNVTLIVDAL KARFPGGDCE DGSGQVRAYL SGALPMVGLP GEMSGPALCR DGKLTFDMAS PSGREQEQVT ILSPTKFKVR LFIKPTAPRV EQILQSHGFQ RADDGYAYEE ERSI
|
| |