Gene Swit_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0543 
Symbol 
ID5200650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp597665 
End bp598369 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content68% 
IMG OID640580084 
Producthypothetical protein 
Protein accessionYP_001261049 
Protein GI148553467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACGA TCCTGCTGTT TCTGCTGGTC GTCGCGGCGG CCGTCGTCGC GATACCGTTC 
ATTCCGCTCA AGACCGCGAT CGGCCTGATG CAGCTCGACC GCGTCGGCTT CGAGGCCGCG
CAGGTCGAAG GCAATCTGTG GGAGGGGCAG CTCTACGACG CCCGGCTCGC CAAGATACAG
CTCGGCGACG TGACGAGCCG GATGTCGCTC GCGGATGCCG CCAAGGGTCG TATCCGCCTC
GACGTCGAGG GCACCGACGA GGTCTCGCGG CTGAAGGGCG TGTTCAGCTA CGGCCTCGGC
GGCGCGGGGA TCGACGATTT CAGCGTCGGC ATGCCGGTGG TCGCGGGACC GCAGCCGATC
GGCAACGTCA CCCTGATCGT CGATGCGCTC AAGGCGCGTT TCCCCGGCGG CGACTGCGAA
GACGGTAGCG GCCAGGTCCG CGCCTATCTG TCCGGCGCGC TGCCGATGGT CGGCCTGCCC
GGCGAGATGA GCGGCCCGGC GCTGTGCCGC GACGGCAAGC TCACCTTCGA CATGGCGAGC
CCGAGCGGGC GCGAGCAGGA ACAGGTGACG ATCCTGTCGC CGACCAAGTT CAAGGTCCGC
CTGTTCATCA AGCCGACCGC GCCGCGGGTC GAGCAGATAT TGCAGTCGCA CGGCTTCCAG
CGCGCCGACG ACGGCTATGC CTATGAGGAG GAACGCTCGA TCTGA
 
Protein sequence
MRTILLFLLV VAAAVVAIPF IPLKTAIGLM QLDRVGFEAA QVEGNLWEGQ LYDARLAKIQ 
LGDVTSRMSL ADAAKGRIRL DVEGTDEVSR LKGVFSYGLG GAGIDDFSVG MPVVAGPQPI
GNVTLIVDAL KARFPGGDCE DGSGQVRAYL SGALPMVGLP GEMSGPALCR DGKLTFDMAS
PSGREQEQVT ILSPTKFKVR LFIKPTAPRV EQILQSHGFQ RADDGYAYEE ERSI