Gene Swit_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0528 
Symbol 
ID5200665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp572173 
End bp573177 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID640580069 
Productarginine succinyltransferase 
Protein accessionYP_001261034 
Protein GI148553452 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3138] Arginine/ornithine N-succinyltransferase beta subunit 
TIGRFAM ID[TIGR03243] arginine and ornithine succinyltransferase subunits 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.556495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG TCCGTCCCGC CGGTCCCTCC GATCTCGCTT CGCTGATGGA GCTTGCCGTC 
CTGTCGGGAC GCGGCTTCAC CAGCCTGCCC GAGGACGAGG CGACCCTGCT CAACCGCCTG
ACCCTGTCCG AAGCGAGCTT CAGCGGCGCC ATCGCCCCGC GCGAGGCGTG GTACACGCTG
ATGCTCGAGG ACAGTGAGAC CGGACGGATC GAAGGGCTCG GCGGCGTCCG CGCGGCGGTC
GGCGTCGCGC GGCCGCATTT CTCGTTCCGG GTGATGACGC TCGCCCAGTT CTCCTCGGCG
ATCAACACGC GCTTCGACCA CAAGGCGCTG GTGCTGGTCA ACGAATGCGC GGGCTGGACC
GAGGTGGGAT CGCTCTACCT GCGGCCCGAG CGGCGCTCGG GCGGCGCCGG CAGCCTGCTC
GCCCGGTCGC GCTACATGCT GATCGGGACC GAGCGGCAGC GCTTCTCCGA GACGGTGATG
GCCGAGCTGC GCGGCTATTT CGCGCCCGAC GGCACCTGCC CCTTCTGGGA CGGCGTCGCG
AGCAAATTCT TCCGCCTGCC GTTCGACGAG GCCGACCATA TGGTGATGTC GACCGACGGC
CAGTTCATCC TCGACCTCGC CCCGCGCCAT CCCATCTATG TCGAGCTGAT CGACACCGCC
GCGCAGGAGG CGATCGGCCG CGTCCATATC GAGGGCGAGG CGGCGCGCGC GATGCTCGAA
CATGAAGGCT TCCGAGGATC GGGACTGATC GACATCTTCG ATGGCGGCCC CACTTATTCC
GTGCCGCGCG ACAGCATCCG GACGATCGAG CGGACCGAGG TGCTGGCGGC GATGAAGGGC
GATCCCGCCG ATGCGCCCGA ACGGCTCGTC TCGACCGCCT CGCTCGGCGG CTTCCGCGCG
ATCCGGGCGA AGGTCCGGAT CGAGGAGGGC GTCGCGACCC TCGACGGCGG GGCGATCGAC
GCGCTGCGGC TCAAATCGGG CGAGATGGTG AGGGTAAGGC AATGA
 
Protein sequence
MLIVRPAGPS DLASLMELAV LSGRGFTSLP EDEATLLNRL TLSEASFSGA IAPREAWYTL 
MLEDSETGRI EGLGGVRAAV GVARPHFSFR VMTLAQFSSA INTRFDHKAL VLVNECAGWT
EVGSLYLRPE RRSGGAGSLL ARSRYMLIGT ERQRFSETVM AELRGYFAPD GTCPFWDGVA
SKFFRLPFDE ADHMVMSTDG QFILDLAPRH PIYVELIDTA AQEAIGRVHI EGEAARAMLE
HEGFRGSGLI DIFDGGPTYS VPRDSIRTIE RTEVLAAMKG DPADAPERLV STASLGGFRA
IRAKVRIEEG VATLDGGAID ALRLKSGEMV RVRQ