Gene Swit_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0515 
Symbol 
ID5200489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp558258 
End bp558833 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content69% 
IMG OID640580056 
Producthypothetical protein 
Protein accessionYP_001261021 
Protein GI148553439 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.838084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.7935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACA GCATCGGCCG ATGGTGGCGC AAGAACGCCC CGACCCGCGA ATCGCTGGAG 
GAGGTGCGCT GGCTGCGGCC CTTCGCCCAT CGCGTGCTGG AGCCGGCGCT GTGGCGCTTC
ACCCGCCGGT CGGTGCCGCG CGGGGTGGCG CTGGGCCTGA TCGTCGGCCT GTTCCTGATG
ATTCCGGGGC TGCAGATCAT CGGCGCGGCG CTGCTCGCGT TGCCGTGCCG TGCCAATGTG
CCGATCGCCG TGGCGATGAC CTTCCTCAGC AATCCCGCGA CGACGCCGTT CATCCTCTAT
CTCTCGATCA TCGTCGGCAA TCGCTTCATC CACTCGACGG TCGACGTCGG CACGGTGATG
ACGATGATCA ACCAGGGCGC CAGCCTCGCC GAATGGGCGG CATGGCTCGC CTCGGCGGCG
GCGCCGGCGC TGGTGATCGG GCTGTTCGTC ATCTCGGTGA TCACGGCGGC GGTCGGCTAT
CTCGCCTCGG GCTGCATCTG GCGGGCCTGG ACCTCGCACA AGTGGAACCT GCGCGAGCGC
CATCGCGCCG AGCGGGCGGT GGAAGAGCGG GGTTGA
 
Protein sequence
MFDSIGRWWR KNAPTRESLE EVRWLRPFAH RVLEPALWRF TRRSVPRGVA LGLIVGLFLM 
IPGLQIIGAA LLALPCRANV PIAVAMTFLS NPATTPFILY LSIIVGNRFI HSTVDVGTVM
TMINQGASLA EWAAWLASAA APALVIGLFV ISVITAAVGY LASGCIWRAW TSHKWNLRER
HRAERAVEER G