| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0503 |
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| Symbol | |
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| ID | 5199738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 542637 |
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| End bp | 543593 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640580044 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_001261009 |
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| Protein GI | 148553427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.509215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.597175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCG CCACCCCCGC GCTGCCGGCG CTGGCGGAGA TCGAGGCCGC GCGCGAACGG
ATCGCCGGGA TCGCCGATCC GACGCCGCTG GTCCGCCTCC AGGCCGACGG GCGCGCCGAT
ATCCACCTCA AGCTCGAAAC GCTTCAGCCC GTCGGCTCGT TCAAGGTCCG CTGCGCGGCC
AACGCGCTGC TCCGCCGGGT CGAGGCCGGC GCGCGCGACG TCTCGACCGC GAGCGCGGGC
AATTTCGCGC AGGGCCTCGC CTATGCGGGG CGCGAACGTG GCGTCAAGGT GACCGCCTAT
GTCCCGGAGA CCGCCGCCGA GAGCAAGCTC GACGGGCTCC GCCGGCTCGG CGCGGCGATC
GTCGCGCTGC CCTATGACCG CTGGTGGGCG ATGCTCGCCG AGGGTAGCGA CGATGCCGGC
TTCATCCATC CGGTCGCCGA TCCCGACGTG CTGGCGGGCA ACGGCACGAT CGGGCTGGAG
CTGCTCGACG CGCGCCCCGA CCTCGCGGCG GTCATCGTCC CCTATGGCGG CGGCGGGCTG
ATCAGCGGAA TCGCCGCCGC CCTGAAGGCA CGCGGATCGA ACGCCCGCGT CATCGCCTGC
GAGACCGAGG CCGGCGCGCC GCTGCGCGCG GCGCTGGCCG CCGGGCGGCC GGTCACCATC
CCGTTCGATT CGGGCAGCTT CGTCACCGGC ATGGGCGGCC CCGCCGTGAT CCCGGCGATG
TGGCCGCACG TCCGCGCGCT GGTCGACGAC ACCGCGCTCG TCTCGCTCGC CGAAACGGCA
GCGGCGGTGC GGCTGCTCGT CGAGCGTCAC CACCTGATCG CCGAGGGCGC CGGCGCGGCC
CCCGTCGCGG CGGCGCTCGC CCGCCAGGAA GCGGCGGGCC CGGTCGCCTG CATCGTCTCC
GGCGGCCATC TCGATCTCGG CCATCTCGTC ACCATCCTGG GCGGTGCGGT GCCCTGA
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| Protein sequence | MAVATPALPA LAEIEAARER IAGIADPTPL VRLQADGRAD IHLKLETLQP VGSFKVRCAA
NALLRRVEAG ARDVSTASAG NFAQGLAYAG RERGVKVTAY VPETAAESKL DGLRRLGAAI
VALPYDRWWA MLAEGSDDAG FIHPVADPDV LAGNGTIGLE LLDARPDLAA VIVPYGGGGL
ISGIAAALKA RGSNARVIAC ETEAGAPLRA ALAAGRPVTI PFDSGSFVTG MGGPAVIPAM
WPHVRALVDD TALVSLAETA AAVRLLVERH HLIAEGAGAA PVAAALARQE AAGPVACIVS
GGHLDLGHLV TILGGAVP
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