Gene Swit_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0498 
Symbol 
ID5198112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp535643 
End bp536431 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID640580039 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_001261004 
Protein GI148553422 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.866988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC CGGTTCCCGT CCTTGCCGCG CCCGATTATT TCCTGCCCAC GACGATCGCC 
GAGGTCGGCG ACCTGCTCAT CCATTACGAC GGCCGCGCAA GGCTGCTCGC CGGTGGCCAG
ACGCTGATCC CCGAACTCGA TCGGCCGGGC GGCGCGCCCG ACGCGCTGAT CGACCTGCGC
CGCATCGCCG AGCTTGGCCG GATCGAGTGG CGCGCCGACC ATGTCGAGAT CGGCGCGATG
GTGACGATCG CGGCGGCGCG GGCCGAACTG GCGCGGGCCT TTCCGGTCGT GGCAGCCTGT
CTCGGCCATG TCGCCAACAG CGCGGTGCGC AACCGCGCGA CCCTGGGCGG CAGCCTCGCC
CTCGCCGATC CGGCCTCGGA GATATCGACC TTCCTGCTCG CCTATGACGC CGAGGTCATG
CTCGCCGGGG GCGAAGCGCG GCCGGTGGAC CGGCTGATCA CCGGTCAGGC GAGGGAACCC
GCTTTCATCC GCGCGATCCG CCTGCCCTTC CCCGCCGAGC GCGAGCATGT GGGTTTCGCC
GAAATCCTGC GGCGGCGCTC GGGTGGCCGG TCGCTGGCGA TGGCGCTCGC GCGGCTCGAC
GCCGGGCGCG CCCGGCTGAC GGTCAGCGGC GGAACATGCC AACCTTTCCG CATCGAAGCC
ACGGATGGCC CCGCGCTGCT CGAAACGCTC GCGGCGCGAT CCCCGGCCTT CGATGCACCA
TCAACACGAT CCTGGGCGCT CGCCGCCGCG CGCCGGGCGA TCGCGACGGC GGAAGACGCG
GCATGCTGA
 
Protein sequence
MDDPVPVLAA PDYFLPTTIA EVGDLLIHYD GRARLLAGGQ TLIPELDRPG GAPDALIDLR 
RIAELGRIEW RADHVEIGAM VTIAAARAEL ARAFPVVAAC LGHVANSAVR NRATLGGSLA
LADPASEIST FLLAYDAEVM LAGGEARPVD RLITGQAREP AFIRAIRLPF PAEREHVGFA
EILRRRSGGR SLAMALARLD AGRARLTVSG GTCQPFRIEA TDGPALLETL AARSPAFDAP
STRSWALAAA RRAIATAEDA AC