Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0483 |
Symbol | |
ID | 5199985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 517912 |
End bp | 519090 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580023 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_001260989 |
Protein GI | 148553407 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.540939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCA GCAAGATCGC CCTGCTTTCG GCTGTTTTCC TGATGGCGGC CATCCCGGCC GAGGCCGCCG CGCCGCCGTT CGACACGCCC GCGCCGGTCG CGTTCCTCAA GGATCTTTCG TCGGGCGCGA TCCTCTACGC CAAGAATCCC GACCTGCGCA TGCCGCCGGC GTCGATGGCG AAGATGATGA CCGTCTATGT CGCCTTCGAC CTGATCCAGA AGGGCGAGCT CAAGCTCGAC GCCATGGCCA CCGTCCGGCC CGAGACGTGG AAGCAGTGGC ACGGCCCGGC GGCGGGATCG ACCATGTTCC TGTCCCCCGG CGAGCAGGTG AGCGTCGCCA ACCTGCTGTT CGGCATCGTC ACCCTGTCGG GCAACGACGC CTGCGTCGTG CTGGCCGAGC ATATCTCGGG CACCGAGCAG GCGTTCGTCG CGCTGATGAA CCGCCGCGCC AAGGAGATGG GGCTGACCAA CAGCCATTTC GGCACGTCGA ACGGCTGGCC CGACGGCGGC GCCACCTACG TCACCGCGCG CGACCTCGCG ACGCTCGCCG AGAAGACGAT CGAGGAGCAC CCCAAGCTCT ACAAGACCTT CTACAGCCGC CCCAGCTTCA CCTGGGGCAA GACGATGGGC GGCGGGCAGG ACATCACCCA GGCGAACCGC GACCCGCTGC TCGGCCGCGT GGCGGGCGCC GACGGCCTCA AGACCGGCCA TACCGAGGAG GCCGGCTTCG GCTTCACCGG CTCGGCCGAG CAGAATGGCC GCCGTCTCGT CATGGTCCTG TCGGGACTGA CCTCGTTCAA CCAGCGGATC GACCAGTCGG TCTCCTTCAT GAACTGGGGC TTCCGCTCCT GGCAGTCGAA GCCGGTCGTG CCGAAGGGCC GCAAGGTGCA GACTGCCGAG GTCCAGCTCG GCGACGAGCG CGAGGTCGGC CTGGTCGCGC CGAAGGACCT GGTCGTCACC GTCCCGGCCG GGCTGGGTTC GGACCTCAAG ACCAAGGTGG TCTATCAGGG GCCGATCAAG GCGCCGTTCA AGAAGGGCGA CCATATCGCC GACCTCGTCG TCAGCGGTCC CGACATGGTG CCGCAGAAGC TGCCGCTCGT CGCCGACCAG GACGTCGGCA CGGCCGGCTT CTTCAACCGG ATGATGGCGG GCCTGCGCTG GCTGTTCGGC CTCGCCTGA
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Protein sequence | MTRSKIALLS AVFLMAAIPA EAAAPPFDTP APVAFLKDLS SGAILYAKNP DLRMPPASMA KMMTVYVAFD LIQKGELKLD AMATVRPETW KQWHGPAAGS TMFLSPGEQV SVANLLFGIV TLSGNDACVV LAEHISGTEQ AFVALMNRRA KEMGLTNSHF GTSNGWPDGG ATYVTARDLA TLAEKTIEEH PKLYKTFYSR PSFTWGKTMG GGQDITQANR DPLLGRVAGA DGLKTGHTEE AGFGFTGSAE QNGRRLVMVL SGLTSFNQRI DQSVSFMNWG FRSWQSKPVV PKGRKVQTAE VQLGDEREVG LVAPKDLVVT VPAGLGSDLK TKVVYQGPIK APFKKGDHIA DLVVSGPDMV PQKLPLVADQ DVGTAGFFNR MMAGLRWLFG LA
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