| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0481 |
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| Symbol | |
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| ID | 5199599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 515889 |
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| End bp | 517007 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580021 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001260987 |
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| Protein GI | 148553405 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0581873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGTT CGGTGTTGCG TAGGGCGGTC GCCGCCTTGG CTTTGATGGC GGCGGCGGCC
GGGGTGGTGC CGGCGGTCGC GCAGCCGGCG CTGGAGGAAG GGCAGGCGCC CGACGACGCG
GCGCGGCTGA CCGATGCGCC CGCCGCCGCG GTTCCGACCG AGGACAGCCG GATGCGCGCC
TTCATCGCCA CGCTGCGCCC GCGCGCGCTG GCGATGGGGA TTTCGCCGAC GCTGTTCGAC
GCGACCCTGC CGACGCTGAG CTTCAACGCT CGGGTCGTCC GGCTCGATCG CGGCCAGCCC
GGGGCGAGCC CCACCAGCAC CGCCGCGCCG CCGCCCTTCG CGCCCTATCT GGCCAGCCAT
GTCGACCGGG TCCGGATCAA CATGGGCCGC TCGCGCTACG GCTCGCTCCG TCCGCTGCTG
CTGCGGATCG AGCAGGAGAC GGGCGTGCCC GAGCAGATCA TGCTCGCCAT CTACGGGCAC
GAGACCGGCT ATGGCACCTT CACGGGCAAT TTCGACCTGC TCAACGCGCT CGGCACGCTG
GCCTATGAGG GCCGCCGGCG CGAACTGTTC GCCGACGAGT TCCTCAAGAC GCTGTTGCTG
ATGAACCGCG GCGTGCCCCG CAGCCAGCTC AAGGGAAGCT GGGCAGGCGC CACCGGCTAT
CCGCAATTCC TGCCGAGCGT CTATCTGCGC CTCGCGATCG ACGGCGACAA TGACGGCAAG
GCCGACATCT GGCGCAGCGA GCCCGACGCG CTCGCCTCGA TCGGCAATTA TCTGCGTGAC
GCGGGCTGGA AGAAGGGCGT CCCCTGGGGC GTGGCGGTGC GCGTTCCCGA GGGGATCGAC
CGGGCGGCGA TCCGCTCGCC CCTGTCGTCG CCGCGTTGCC CGCGCGTCTT CGCCCGGCAG
AGCCGCTGGC TGACCATCGC CGAATGGCGC GACAAGGGGC TGATGATGCT GAGCGGCCGG
GTGCCGGCCG AGAACGAGCT GGCGACGCTG ATCGAGCCCG ACGGCAACGG CAATACCGGC
TATCTGCTGA CCACCAACTA CCGCTCGATC CTCGATTACA ACTGCTCCAA TTTCTACGCG
CTGTCGGTCG GCCTGCTTGG CGACGCGATC GTCGAATGA
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| Protein sequence | MRSSVLRRAV AALALMAAAA GVVPAVAQPA LEEGQAPDDA ARLTDAPAAA VPTEDSRMRA
FIATLRPRAL AMGISPTLFD ATLPTLSFNA RVVRLDRGQP GASPTSTAAP PPFAPYLASH
VDRVRINMGR SRYGSLRPLL LRIEQETGVP EQIMLAIYGH ETGYGTFTGN FDLLNALGTL
AYEGRRRELF ADEFLKTLLL MNRGVPRSQL KGSWAGATGY PQFLPSVYLR LAIDGDNDGK
ADIWRSEPDA LASIGNYLRD AGWKKGVPWG VAVRVPEGID RAAIRSPLSS PRCPRVFARQ
SRWLTIAEWR DKGLMMLSGR VPAENELATL IEPDGNGNTG YLLTTNYRSI LDYNCSNFYA
LSVGLLGDAI VE
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