| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0401 |
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| Symbol | |
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| ID | 5198353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 425258 |
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| End bp | 426847 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579939 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001260907 |
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| Protein GI | 148553325 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0202652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0631303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGAAGA GTAGCAGCGC GCTGGGGACG CCCGAGGCGG CGGCCCGCAC GTCCCTCACC
ACCCGCATCC TCGCGGTCAA CATCTTCGCG CTGGCGATGC TGGCGGGCGG CTTCTTCTAC
CTGGACAGCT ACCGCGCCCA GCTCATCGAC GCCCGGCTCG AGGAGACCGC CACCCAGGTC
CGCCTGGTCG CCGAGGCCTA TGCGGTGACG CCGCCGGCTG GACGGCCGCA GCTCCTCTCG
AAGTTCGGCC TGCTCACCGA CACGCGGCTG CGCGTCTACG CCTATCCCTC GCCCGCCGCA
CGCGCGTCCG AGGTCGTCCG CAGCTTCGAC AGCTGGTCGA TCTCCGGCCC GACCTACCAG
CTTCGCGATC CCTCGCAGGA GGAATGGCAG AAGCGGGTCG CCCGCTTCCT CGACCGGTCG
ATCGACATCA TCGTCGACGC CGACCATCCC GAGCATTTCC AGGAACCGGC CCGCGACACC
CTCGCCGCCT GGCCGATCGC CCTGCGCGCG GCGCGCGACC CCAACATCGA GACCTCGGTC
GAGCGGGCGC CCGACCGGAC GCCGATGATC CTGGCCGCGA TCGACGTCCG CCGCCCCGAC
GGCAGCGGCG CGGTGATCCT GTCGACCGAG AACCAGCGCG ACATCACCCG GATCGTCCGC
GCCGAGCGGC TCCGCCTCGG CGTCGTGCTG CTGATCGTCG TGCTCGTCTC GGTCAGCCTG
TCGCTGTTCC TGGCGCGCAC GATCGTCCGT CCGCTCCGCC GCCTTGCGCT CGCCGCGCAC
CGCGTCCGCC TCGGCCGCGC GCGCGAGGTG CAGGTGCCGC GCCTGCCCGA GCGGCGCGAC
GAGATCGGCA CCCTCGCCCG CGCCTTGTCC GACATGAGCA TGGCGATCCG GCAGCGGATC
GACGCCACCG AGGCCTTCGC CGCCGACGTG ACCCACGAGC TCAAGAACCC CCTCGCCTCG
CTGCGCTCGG CGGTCGACAG CCTCGGCATC GTCAAGGAGC CGGCGCTCCA GAAGCAGCTG
ATCGACGTGA TCCGCGACGA TGTCGGCCGG CTCGACCGGC TGATCACCGA CATCGCCGAG
GCGTCGCGGG TCGATGCCGA ACTGGCCCGC GCCCGCTTCG AATCGGTCGA TCTCGGCACG
ATGATCGAGG GCCTGCTGAC CACCCGCGAG GAACGCGGGC GCAACGGCGA CGTCCGCGTC
GCCTTCGCCC GCCCGCATCG CGGCACCGCC GTGGTGTTCG GCGACGGATC GCGGCTGACC
CGGGTGATCG AGAACCTGGT CGAGAATGCG GTGTCCTTCT CGCCCGCAGC GGGCCTCGTT
CAGGTTGCAG CCACCCGCGA TGGCGATGAT GTCGTGATCA GGGTGGAAGA TGAAGGACCC
GGCGTGCCGC CCGACGCGCG CGAGGCGATC TTCAACCGGT TCCACAGCGA CCGCCCCGAG
GGCGAGGAAT TCGGCCGGCA CAGCGGCCTC GGCCTCGCCA TAGCGAAGGC CATCGTCGAG
GGTCATAATG GTTCGATCGT CGCGACCGAC CGGGACAATG CGCCGAACGG CGCCAGGTTC
GTCATCCGCC TGCCGGCCTG GAGCCGCTAG
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| Protein sequence | MAKSSSALGT PEAAARTSLT TRILAVNIFA LAMLAGGFFY LDSYRAQLID ARLEETATQV
RLVAEAYAVT PPAGRPQLLS KFGLLTDTRL RVYAYPSPAA RASEVVRSFD SWSISGPTYQ
LRDPSQEEWQ KRVARFLDRS IDIIVDADHP EHFQEPARDT LAAWPIALRA ARDPNIETSV
ERAPDRTPMI LAAIDVRRPD GSGAVILSTE NQRDITRIVR AERLRLGVVL LIVVLVSVSL
SLFLARTIVR PLRRLALAAH RVRLGRAREV QVPRLPERRD EIGTLARALS DMSMAIRQRI
DATEAFAADV THELKNPLAS LRSAVDSLGI VKEPALQKQL IDVIRDDVGR LDRLITDIAE
ASRVDAELAR ARFESVDLGT MIEGLLTTRE ERGRNGDVRV AFARPHRGTA VVFGDGSRLT
RVIENLVENA VSFSPAAGLV QVAATRDGDD VVIRVEDEGP GVPPDAREAI FNRFHSDRPE
GEEFGRHSGL GLAIAKAIVE GHNGSIVATD RDNAPNGARF VIRLPAWSR
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