| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0352 |
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| Symbol | |
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| ID | 5199588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 372916 |
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| End bp | 373818 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579892 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260861 |
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| Protein GI | 148553279 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCGG GTTTCCTCGA CGAACGCGCG GGGCTCGGCG GCAAGGTCGC GGCGGTGGTC
GGCGGCGGCT TCGGGATCGG CGCGGCGATA TCGACGGCGC TGGCCGAGGC CGGGGTCGAC
CTGGCGATCT GCGACATCGA CGCGGCGGCG ATGGAGGAGA CCGCGCAGGC GGCCCGCGCG
CTCGGCCGCA CCGTCACGAC CTGCCACGCC GACGCGACCG ACGAGGCCGC GCTCGACGCC
TATTATGACC GACTCGCCAA GGATTTCGGC CGCCTCGACA TCCTCGTCAA CGTCGCGGGC
GGGACCCGGC GGCGCGCCTT CATGGAGGCG AGCCGCGCCG CCATCGCCGA CGATATCCAG
CGCAACTACG GCTATGTCGT CCAGTCGGTG CAGCGCGCGG TGCCGCTGAT CCGCCGTTCG
GGCGACGGCG GCAGCATCGT CAGCTTCACC ACGATCGAGG CGCATCGCGG CGCGGCGGGC
TTCTCGGTCT ATGCCGGGGC CAAGGCGGCG ACCACCAACT TCACCCGCGC CATGGCGGTC
GAGCTGGGCA AGGAGAAGAT CCGGCTCAAC TGCATCGCGC CCGACACCAC CCCGAGCCGG
GGCAATATCA ACGGCCTGCC GCCCGAATAT GGCGAGGCGT TTATGCGCCT GCCCGATGCG
GTGAAGCCGC AGGGCATGGC GATGTACATC CCGCGCGGCG AGCAGCCGCC GCCCGAGGCG
CTGGCCGACG CGGTGCTGTT CCTGGCGTCC GACCTCGCCC GCTTCGTCTC GGGCACGACA
CTGCATGTCG ACGGCGGCAC GATGGCGGCG GCCGGCTTCC TCGACTGGCC GTTCGGCGAC
GGCTTCGTGC CGGTGCCGCT CGCGGGGACA CTCGAACGCA TGTACCGTGA CGGCGATGGC
TGA
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| Protein sequence | MMAGFLDERA GLGGKVAAVV GGGFGIGAAI STALAEAGVD LAICDIDAAA MEETAQAARA
LGRTVTTCHA DATDEAALDA YYDRLAKDFG RLDILVNVAG GTRRRAFMEA SRAAIADDIQ
RNYGYVVQSV QRAVPLIRRS GDGGSIVSFT TIEAHRGAAG FSVYAGAKAA TTNFTRAMAV
ELGKEKIRLN CIAPDTTPSR GNINGLPPEY GEAFMRLPDA VKPQGMAMYI PRGEQPPPEA
LADAVLFLAS DLARFVSGTT LHVDGGTMAA AGFLDWPFGD GFVPVPLAGT LERMYRDGDG
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