Gene Swit_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0350 
Symbol 
ID5199920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp370448 
End bp371356 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content75% 
IMG OID640579890 
Productalcohol dehydrogenase 
Protein accessionYP_001260859 
Protein GI148553277 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC GCGCGGTCGC GATCCGGGGC CATGGCGGGC CCGAGGTGCT CGAGTTCGGC 
ACCTGGCCGC ACCCGATGCC GAAGCCCGGC GAGGCGGTGG TCGCGATCCG CGCCGCGGCG
GTCAATCCGG CCGACGGCAA GTGGCGCGCC GGCATGTTCG CCGGCTTCGC GCCGGTCTCC
TTCCCCCATA TCCTCGGCTA TGACGTCGCC GGGGTGGTAG TGGGCGGCGC GGGCCTCACG
CCCGGCACCC GCGTCGCAGC CATGCTCGAT CCTTTCACCA AGGGCGGCTA TGCCGACTAT
GTCGCGGTGG CGGCCGACCG GCTCGTCGCG ATCCCGGACG GCCTGTCCTT CGAGGTCGCG
GCGGCGGTGC CCACGGCGGG GCTGACCGGC GCGCAACTGA TCGAGCGCGC GGTCGACGCG
CGGCCGGGCC AGTTCGTCCT GCTGACCGGC GCGGTCGGGG CGGTCGGGCG GTTCGCGCTC
GATGCGGCGC GGCGGCGCGG GGTCGAGGTC GTCGCGGCGG TGCGCGGGAC GCGCAAGGAC
GAGGCGCTGG CGCTCGGCGC GGCGCAGGCG ATCGCGCTCG GCGAGGATGA TTGGTCGGGC
GGGCCCTTCG ATCATGTCGT CGACACGGTC GGCGGCGATG CCGTCGCGGC GCTGTGCCGG
CATCTCCGCC CCGGCGGCCG GATCGCCACC GCCGCGACCA CGCCGATCGA TCCGCAAGGC
CTGGCCGCCA TCCCTGAATT CTACGCCGTG GTCGCCGATG CCGAGCGGCT CGGCCGGCTG
CTGGACGCGG TCGCGAAGGG CGAGATCGCG GTGCCGATCG CGCGGGTGAT GCCGCTGGAG
GAGGCCGCCG AGGCGCAGCG CCTCACCGAT GCCGGCGGGA CCGGCGGCAA GATCATCCTC
ACGCCTTGA
 
Protein sequence
MTMRAVAIRG HGGPEVLEFG TWPHPMPKPG EAVVAIRAAA VNPADGKWRA GMFAGFAPVS 
FPHILGYDVA GVVVGGAGLT PGTRVAAMLD PFTKGGYADY VAVAADRLVA IPDGLSFEVA
AAVPTAGLTG AQLIERAVDA RPGQFVLLTG AVGAVGRFAL DAARRRGVEV VAAVRGTRKD
EALALGAAQA IALGEDDWSG GPFDHVVDTV GGDAVAALCR HLRPGGRIAT AATTPIDPQG
LAAIPEFYAV VADAERLGRL LDAVAKGEIA VPIARVMPLE EAAEAQRLTD AGGTGGKIIL
TP