| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0336 |
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| Symbol | |
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| ID | 5200968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 358103 |
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| End bp | 359446 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579876 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001260845 |
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| Protein GI | 148553263 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.102143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCAGC CAGTGCAACA GATGCAGCCC GAGATCACCC GGCGCGCCAA GGCCGGGCCC
GACGACTTCA TCCCCAAGGA AGATTATGTC TCGCGCGACT TCGCCCGGCG CGAGGCCGAG
CGGTTGTGGC CGCGCACCTG GCAGATGGCC TGCCGCGAGG AGGAGATTCC CCGGGTCGGC
GACTATGTGA CCTATGACGT GCTCGACGAG TCGATCATCG TCGTCCGCAC CGCGCCCGAC
CGCATCGCCG CCTATCACAA TGCCTGCCAG CATCGCGGCC GCCGGCTGGC CGAGGGCTGC
GGCCATGCCG CGCGGCTCCA TTGCCGCTTC CATGGCTGGT CGTGGAAGCT CGACGGCACC
ATCGCCCATG TCGTCGACCG CGACAATTGG GACGGCAGCC TGAAGGACGA GGACATCGCC
CTGCCCAAGG TGCGGGTCGA CAGCTGGGGC GGCTGGGTGT TCGTCTGCAT GAGCGAGGAG
ACCGAGCCGC TGCTCGAATT CCTGGCGCCG CTGCCGGAGG TGTTCCGCAA CTATCCGTTC
GAGAGGATGC GCTATCGCTG GTACAAGTCG ACCGGCATCG CCTGCAACTG GAAGACCGCG
CTCGAAGCCT TCAACGAGGG CTATCACGTC CAGACCACCC ACACCCAGCT ATTGCCCGTC
CACGACGACG AGGCGCTGGC CCATGCCGAG GGCCGACACG GCAGCTACCA GCTCGCCCCC
GGCCGCATCT CGCTGGGCGA GCGATCGCCG CGGCTGGCCG CCCGGACGGT CGACTATCGG
CACAATGTCC GCGACTTCGT GCTGATGCTC GAACAGGACC TGAAGGCCTC GATCCCGCCG
CACATGGCCG GGCTGATGGA CCGGCTGGTC GAGGAGCTTC CGGCCGAGGC CAGCCTGCTC
GACGTGCTGA TGAAATACGG CCAGATCGCC TATGAGGCGG CCGGCGAGCG CGGCATCCCC
TTCCCGGCGC TCACCCCCGA GGAGATCGCG CGGGCCGGCG CCGACTGGCA CCTCTTCCCC
AACATGGTGT TCCTGCCCGC GCCCGACGCG ATGCTCGCCT ATCGCGCGCG GCCCGACCGC
GACGATCCCG AGCGCTGCAT CTTCGAGGTC TATTCGCTGC TGCTCTACCC GGAAGGCGAG
GAGCCTCCGC TCGAACGGCA ATGTTTCGCG GACTGGAAGG ATCACGACGG CTGGGGCCTG
ATCCTCGAAC AGGATTTCCA GAACATGACC GAGGTCCAGC GCGGCATGCG GTCGCGGGGC
TTCACCGGAT CGCGCACCAA CCCCGTGCAG GAGAAGAGCG TGTCCAATTT CCACCGCGCC
CTGCGCGAAT TCATCAGCGA ATAG
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| Protein sequence | MDQPVQQMQP EITRRAKAGP DDFIPKEDYV SRDFARREAE RLWPRTWQMA CREEEIPRVG
DYVTYDVLDE SIIVVRTAPD RIAAYHNACQ HRGRRLAEGC GHAARLHCRF HGWSWKLDGT
IAHVVDRDNW DGSLKDEDIA LPKVRVDSWG GWVFVCMSEE TEPLLEFLAP LPEVFRNYPF
ERMRYRWYKS TGIACNWKTA LEAFNEGYHV QTTHTQLLPV HDDEALAHAE GRHGSYQLAP
GRISLGERSP RLAARTVDYR HNVRDFVLML EQDLKASIPP HMAGLMDRLV EELPAEASLL
DVLMKYGQIA YEAAGERGIP FPALTPEEIA RAGADWHLFP NMVFLPAPDA MLAYRARPDR
DDPERCIFEV YSLLLYPEGE EPPLERQCFA DWKDHDGWGL ILEQDFQNMT EVQRGMRSRG
FTGSRTNPVQ EKSVSNFHRA LREFISE
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