Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0335 |
Symbol | |
ID | 5200967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 357327 |
End bp | 358085 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640579875 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001260844 |
Protein GI | 148553262 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0299657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGGC TCAGCGGCAA GGTCGCGATC ATCACCGGCG GCGGTCAGGG CGTGGGCCAG GGCATCACCC AGGTCTTCGC GCGCGAAGGC GCCAGGGTGC TGATCACCGG CCGCACCCCC GACAAGCTGG AGGCGGCGGT CGCCGAACTC AAGGCGGCCG GCGGCGACGC CGCCTGGATC GCCGGCACCG CCGGGGTCCG CGCCGATGCC GAGGCGGCCG TCGCCAGGGC GGTAGAACTG TTCGGCGGGC TCGACATCCT GGTCAACAAC GCCCAGACCT CGCGCCCCGG CGCGCTGTTC GAGGATACCG ACGACGATCT GTTCGCGCTG ACGATCAACT CGGGGCTCTA CGGCACCTTC CAGCACATGC AGGCGGCGCT GCCCGCGATG AAGAAGCGCG GCGGCGGATC GATCATCAAC TTCGGCTCCT ATGAAGGCAT CCACGGCGGC ATCGGCTTCG CCGCCTATGC CGCTACCAAG GAGGCCATTC GCGGCCTGTC GCGCACCGCC GCGCGCGAGC TGGGCAAGCA CAAGGTCCGC GTCAACGTGA TCTGCCCCGC CGCGCTGAGC CCGATCGCCG AGCAATGGGT CAAGGACTTC CCCGAGGAGG CCGAGAAGGT GATGAAGCTC GTCGCGCTCG GCTATCTGGG CGACTGCGCC GAGGACATCG GCCCGGCCGC GTTGTTCCTG GCCAGCGACG ACAGCCGCTA CGTCACCGGC CAGACGATCA ACGTCGACGG CGGCCAGATG ATGCTCTGA
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Protein sequence | MGRLSGKVAI ITGGGQGVGQ GITQVFAREG ARVLITGRTP DKLEAAVAEL KAAGGDAAWI AGTAGVRADA EAAVARAVEL FGGLDILVNN AQTSRPGALF EDTDDDLFAL TINSGLYGTF QHMQAALPAM KKRGGGSIIN FGSYEGIHGG IGFAAYAATK EAIRGLSRTA ARELGKHKVR VNVICPAALS PIAEQWVKDF PEEAEKVMKL VALGYLGDCA EDIGPAALFL ASDDSRYVTG QTINVDGGQM ML
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