Gene Swit_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0201 
Symbol 
ID5201007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp202761 
End bp204317 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content58% 
IMG OID640579740 
Producthypothetical protein 
Protein accessionYP_001260710 
Protein GI148553128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.129066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAT TCCCCGAAAA ATCGGCCCCC GTCCTCTACA TTCCCGAGCC GCCACTCGGA 
TTTGGGCATG GGCAGACGTC TGATCATCCG AAGGATGGCC TCACTCTCTA TGGCCCGGCC
TCAGCGCCCG ATCGTCCGCA GATCACGATC GGCGCAGTTG GCACCAAGCA CGGCCTGGGA
TTCCTCCGAC GCTGGCTCGA AGCGATCAAC ACACCTGTTG CGATTCCGCC TCGTGGCAAA
CGCGACAAGG AGTTCCGCCT GCATTTGTCG GATTTTCCCG GCCTCGAAGA GGCATTCGGG
ATCCGTACCG ATCCGGCCGC CTTGATCACG TATGAGCTCG AGACCACGGA AATCGAGGCT
GCCATAGCGA TCGAGAACCA TCACGAGGCG GTGGCAGCGA CGACCAAGTT GTTCATCGAC
CCCATCGATC GCCACGCAAA GAATGAGGAG CGAACGGTCG ATGTCTGGAT CTTTGTCGTG
CCGGAAGCGG TGTTCGAAAC CTGCCGACCA GTTGCGGGTC AACGCCGAAA GGTCGAGCTC
GTAAAGGGGG AGCTTTCCAA ACGCCAGAAA GGCCGCGCCG ATCTTCCGCT GCTGGCTGGG
ATCATCGATA ACACGCTTGA GGCTGTGTTC GATGACATCC CTGACTTCCA CCGTCAGATC
AAGGCGAAGC TGTTGAAGCA GGGAATGACA TCCCAGCTCA TTCGCGAGAC GACCCTGGCT
CCCTACGAGT TCGTGAACAA GGCAGGATAT CCGAAGCGCG GCACCCAGGA TTCTGCTACC
GTCGCCTGGA ACCTGGCGAC TGGCCTGTTC TACAAGACGC AGGCTGAGCC CCCCTGGAAG
ATTGCCGGCA TGCGGCCGGG AGTCTGTTAT GTCGGCTTGG TCTTTAAACT CCTCCCCAAC
CATCCCGATA ATCACGCCTG CTGCGCGGCG CAGATGTTCC TTAGCGAAGG AGACGGCGTC
GTCTTTCGCG GGGCGAACGG ACCTTGGCAG ACCGAAAACA GGGAATTCCA CCTCAACGAT
CTGGCGGCTG GGAAGCTGAT TAAGACGGTT CTGGATACAT ACAAGCAGCG CTTTGGGGCC
TATCCAAAAG AGCTGTTTAT TCACGGCCGG ACCAAATTCA ACGACGCCGA ATGGGATGCG
TTCAGCAAGG CCGCGCCGGA TAGCACCAAT ATCGTAGGGG TCCGTATCCA GTCGACCCAC
GGCGAGACAA AGTTCTTCCG CGATGGCGAT TATCCATGCC TTCGCGGTAC GGCAATCCGG
CTTGGCGACA AGGATGCCTT CCTGTGGACT ACGGGATATG CGCCCCGCAT CGACACCTAT
ATCGGCCCGG AAACACCTAA CCCGCTGTTC GTGACCGTGC TGCGCGCCAG CGGGGAATTT
CCGGCTGTCG AGGTCGTGCT GACCGACATT CTCGGCCTCA CAAAGATCAA CTATAATGCT
TGTAATTTCA GCGACGGGCT TCCGGTCACC ATTCGTTTCG CGGACAAGGT TGGTGAAGTG
CTGACCATGG GAAGCGCCGC TGGAGCTGAG CGGCAACCCT TCAAATTTTA CATCTGA
 
Protein sequence
MIEFPEKSAP VLYIPEPPLG FGHGQTSDHP KDGLTLYGPA SAPDRPQITI GAVGTKHGLG 
FLRRWLEAIN TPVAIPPRGK RDKEFRLHLS DFPGLEEAFG IRTDPAALIT YELETTEIEA
AIAIENHHEA VAATTKLFID PIDRHAKNEE RTVDVWIFVV PEAVFETCRP VAGQRRKVEL
VKGELSKRQK GRADLPLLAG IIDNTLEAVF DDIPDFHRQI KAKLLKQGMT SQLIRETTLA
PYEFVNKAGY PKRGTQDSAT VAWNLATGLF YKTQAEPPWK IAGMRPGVCY VGLVFKLLPN
HPDNHACCAA QMFLSEGDGV VFRGANGPWQ TENREFHLND LAAGKLIKTV LDTYKQRFGA
YPKELFIHGR TKFNDAEWDA FSKAAPDSTN IVGVRIQSTH GETKFFRDGD YPCLRGTAIR
LGDKDAFLWT TGYAPRIDTY IGPETPNPLF VTVLRASGEF PAVEVVLTDI LGLTKINYNA
CNFSDGLPVT IRFADKVGEV LTMGSAAGAE RQPFKFYI