Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0201 |
Symbol | |
ID | 5201007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 202761 |
End bp | 204317 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640579740 |
Product | hypothetical protein |
Protein accession | YP_001260710 |
Protein GI | 148553128 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.129066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCGAAT TCCCCGAAAA ATCGGCCCCC GTCCTCTACA TTCCCGAGCC GCCACTCGGA TTTGGGCATG GGCAGACGTC TGATCATCCG AAGGATGGCC TCACTCTCTA TGGCCCGGCC TCAGCGCCCG ATCGTCCGCA GATCACGATC GGCGCAGTTG GCACCAAGCA CGGCCTGGGA TTCCTCCGAC GCTGGCTCGA AGCGATCAAC ACACCTGTTG CGATTCCGCC TCGTGGCAAA CGCGACAAGG AGTTCCGCCT GCATTTGTCG GATTTTCCCG GCCTCGAAGA GGCATTCGGG ATCCGTACCG ATCCGGCCGC CTTGATCACG TATGAGCTCG AGACCACGGA AATCGAGGCT GCCATAGCGA TCGAGAACCA TCACGAGGCG GTGGCAGCGA CGACCAAGTT GTTCATCGAC CCCATCGATC GCCACGCAAA GAATGAGGAG CGAACGGTCG ATGTCTGGAT CTTTGTCGTG CCGGAAGCGG TGTTCGAAAC CTGCCGACCA GTTGCGGGTC AACGCCGAAA GGTCGAGCTC GTAAAGGGGG AGCTTTCCAA ACGCCAGAAA GGCCGCGCCG ATCTTCCGCT GCTGGCTGGG ATCATCGATA ACACGCTTGA GGCTGTGTTC GATGACATCC CTGACTTCCA CCGTCAGATC AAGGCGAAGC TGTTGAAGCA GGGAATGACA TCCCAGCTCA TTCGCGAGAC GACCCTGGCT CCCTACGAGT TCGTGAACAA GGCAGGATAT CCGAAGCGCG GCACCCAGGA TTCTGCTACC GTCGCCTGGA ACCTGGCGAC TGGCCTGTTC TACAAGACGC AGGCTGAGCC CCCCTGGAAG ATTGCCGGCA TGCGGCCGGG AGTCTGTTAT GTCGGCTTGG TCTTTAAACT CCTCCCCAAC CATCCCGATA ATCACGCCTG CTGCGCGGCG CAGATGTTCC TTAGCGAAGG AGACGGCGTC GTCTTTCGCG GGGCGAACGG ACCTTGGCAG ACCGAAAACA GGGAATTCCA CCTCAACGAT CTGGCGGCTG GGAAGCTGAT TAAGACGGTT CTGGATACAT ACAAGCAGCG CTTTGGGGCC TATCCAAAAG AGCTGTTTAT TCACGGCCGG ACCAAATTCA ACGACGCCGA ATGGGATGCG TTCAGCAAGG CCGCGCCGGA TAGCACCAAT ATCGTAGGGG TCCGTATCCA GTCGACCCAC GGCGAGACAA AGTTCTTCCG CGATGGCGAT TATCCATGCC TTCGCGGTAC GGCAATCCGG CTTGGCGACA AGGATGCCTT CCTGTGGACT ACGGGATATG CGCCCCGCAT CGACACCTAT ATCGGCCCGG AAACACCTAA CCCGCTGTTC GTGACCGTGC TGCGCGCCAG CGGGGAATTT CCGGCTGTCG AGGTCGTGCT GACCGACATT CTCGGCCTCA CAAAGATCAA CTATAATGCT TGTAATTTCA GCGACGGGCT TCCGGTCACC ATTCGTTTCG CGGACAAGGT TGGTGAAGTG CTGACCATGG GAAGCGCCGC TGGAGCTGAG CGGCAACCCT TCAAATTTTA CATCTGA
|
Protein sequence | MIEFPEKSAP VLYIPEPPLG FGHGQTSDHP KDGLTLYGPA SAPDRPQITI GAVGTKHGLG FLRRWLEAIN TPVAIPPRGK RDKEFRLHLS DFPGLEEAFG IRTDPAALIT YELETTEIEA AIAIENHHEA VAATTKLFID PIDRHAKNEE RTVDVWIFVV PEAVFETCRP VAGQRRKVEL VKGELSKRQK GRADLPLLAG IIDNTLEAVF DDIPDFHRQI KAKLLKQGMT SQLIRETTLA PYEFVNKAGY PKRGTQDSAT VAWNLATGLF YKTQAEPPWK IAGMRPGVCY VGLVFKLLPN HPDNHACCAA QMFLSEGDGV VFRGANGPWQ TENREFHLND LAAGKLIKTV LDTYKQRFGA YPKELFIHGR TKFNDAEWDA FSKAAPDSTN IVGVRIQSTH GETKFFRDGD YPCLRGTAIR LGDKDAFLWT TGYAPRIDTY IGPETPNPLF VTVLRASGEF PAVEVVLTDI LGLTKINYNA CNFSDGLPVT IRFADKVGEV LTMGSAAGAE RQPFKFYI
|
| |