Gene Swit_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0200 
Symbol 
ID5201006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp201457 
End bp202764 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content61% 
IMG OID640579739 
Producthypothetical protein 
Protein accessionYP_001260709 
Protein GI148553127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.811738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTGGC TCGCGCCGCG TCTCGAAGCC GCCGGATACA AGGTTTTCGC GGACATATTC 
GACCTCGATG CCGGTGATGA ATGGCGCGGA AAGCTGACCG CGGCGCTCCA GACGCGCGCG
GTCAAGATGC TGCTGTGCTG CAGCGACGAG ACGCTCGCCA GGCGAGGCGT TCTCGAAGAA
ATCGCCATCG CCGAGGACCT GACCAAGCAG CTTCCGGACT CCAATTTCAT CATCCCTCTC
AAGATTCGCG CCTTCAAGAA GGTTTTCGGG ATCGGCGGCC TGCAATATGT CGATTTCGAG
AGCGGCTGGG CGAAGGGATT GGCGAACCTC CTGAAGTCGC TTGAAAAGCA GCAGGTACCG
AAGGCCGGCG GCGGCGTTAT CCAGCCCGAG TGGTATGCTT ATCTCCGCCG CCATGCGGTG
GAAATCGAGG GTGCGCCCGA GGTTTTGACC TCCAACTGGC TTCGCATCAT GCGGATGCCG
GACAAGCTTA ACCATCTGGT GCCGCGCAAC CGGGCCAACG AGGCCGTGCT CCGCAAGCTC
GGCGCTTCCT TCGAATTTCC TATGGCCGAA TTTGGCGACG GTTTCCTGAC CTTCGCCAGC
CCGCCCGATC TGGAAGAGTA TTTCGAGCAG GTTGGGCCGT TTCGCACCGA GCGCGACTTC
GATATTCTCG GTTTTCTGGA GAATGGATCG GCGGACGCCG GGATCGAGGG CCGGGACGCC
AAGTCCATCA TGGTCAATCT CTTCCGCCAA GCGTGGGAGA AGCATTGCGT CCGCCAAGGT
TTCCTCGCCC ACACATTCTC AAACGGCCTG TCCTTCCATG TCGGGGAAGA GAAATTTGGC
CTCAAGAAAC GTATGTCGTG GGGCCGGCAG GGCGAACGGC GAAGCTCGAT GCTGCGCGGT
GTCGCTCGCA AGAAGATCTG GGAATATGGC GTCAGCGTCG TTCCCAGCCT GTTTCCCTAT
CCGCACATGC GGCTGAAGGG CCGCGTCCTG TTTTCCGACA TCGGTGATCG CAACAAGGCG
ATCGTCATCC CGGACACGAA GACCCAGTTT CGGCTGCGCC GCTCGGTCTG TTCGAGCTGG
CGGAACAAGG CATGGCATGG GCGTGTGATG GCCTTCATGG AGTTATTGGC CGGCGACAGT
CCTTATGTCG ATCTCGCCGT GGGCTCAGGC GGCAGCATCA CGCTCGACGC GATGCCGATC
CAGTTCACGG CGCCCGTGAC CGCCCGTCAA ACCAATCGCC TCGGCGAGGA TGCGGAGGAT
CCCGACACGT CGACGCTGGG CGGTCACTTT GAGGACGAGG ACGCGTGA
 
Protein sequence
MLWLAPRLEA AGYKVFADIF DLDAGDEWRG KLTAALQTRA VKMLLCCSDE TLARRGVLEE 
IAIAEDLTKQ LPDSNFIIPL KIRAFKKVFG IGGLQYVDFE SGWAKGLANL LKSLEKQQVP
KAGGGVIQPE WYAYLRRHAV EIEGAPEVLT SNWLRIMRMP DKLNHLVPRN RANEAVLRKL
GASFEFPMAE FGDGFLTFAS PPDLEEYFEQ VGPFRTERDF DILGFLENGS ADAGIEGRDA
KSIMVNLFRQ AWEKHCVRQG FLAHTFSNGL SFHVGEEKFG LKKRMSWGRQ GERRSSMLRG
VARKKIWEYG VSVVPSLFPY PHMRLKGRVL FSDIGDRNKA IVIPDTKTQF RLRRSVCSSW
RNKAWHGRVM AFMELLAGDS PYVDLAVGSG GSITLDAMPI QFTAPVTARQ TNRLGEDAED
PDTSTLGGHF EDEDA