| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0173 |
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| Symbol | |
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| ID | 5200324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 163859 |
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| End bp | 164815 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579712 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001260682 |
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| Protein GI | 148553100 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.569723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.401797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTGG CTCCGGAACC ACGTCGGCTG TCGCGACCGC GCCCGTCCCG GCGCCCGGAG
TTCAATCAAC TCGAGATGTT CCTTGAGGTC GCCGACGCGC GAAGCTTCAG TGGCGCCGCG
CGTGGCACCG GCAGGACCCA ACCGGCTGTC AGCCGGGCGA TCGGCCGGCT CGAGAACCTT
TGCGGCGGCG ACCTCTTCCA ACGTCGACCA GGCGCGCCGC TCATACTCAC ACCGATTGGC
GAGGCCATCC TTCCGACTGC GCGGCTGCTG CTGCACACCG TCGACCAGAT GCTGCTGCGC
GCCACGCAGA CCGCGCAAAG CCGGGCAGGA ACGCTCAAGC TCGGCCTCTA CCCCGGCCTC
GCTGCCGGCC CACTACGCGC CGCCCTTACC GACTTCACGC GCGCGAGTCC GGACGTGCAG
CTCAGGCTCA TCGAGGGCAT ACAGAGCGAA CTGCACCGGC AGCTCATGGA CGGCGGAATT
GACCTCATGA TCGCAGCGCT CATGACCGAC CTTGCGAGCA CAGTGCTGAC GCAGGAGGCC
CTGTGGGAGG AGCAGCTCGT TGTTGCACTT CCGGAGGATC ATCCGCTTGC CGCCAAGCCG
GCGCTCGATT GGGGCGACGT GGCTTCGTTG CGAGTCATTC TGTGGACCTC GCCAGGCGGG
TCGGCCGACG GTGGCGTCCT ATACGAGATT GGCGGCCGCG CGATCGAATG CGAGCGGCAT
GCCGTCTCTC GCACCACGCT GCTTGAGATG GTCGCCATGG GTCTTGGCGC GACCATCGCT
TGCGAGTCCG CGGTAGCGCT ATGCACCGGC GTGATTTATC GCCCGATCGA GGACGAAAAT
GCCCTCGCGG TTATCGAGGC GATCTGGCCA ACTTCCGACG GCAATCCGCT CCGGCACCGG
CTGCTCACCG ATATTCGGAG GTGCGCGGCG TCACGAGCGA TGTCCGCGCC AGCCTAG
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| Protein sequence | MPLAPEPRRL SRPRPSRRPE FNQLEMFLEV ADARSFSGAA RGTGRTQPAV SRAIGRLENL
CGGDLFQRRP GAPLILTPIG EAILPTARLL LHTVDQMLLR ATQTAQSRAG TLKLGLYPGL
AAGPLRAALT DFTRASPDVQ LRLIEGIQSE LHRQLMDGGI DLMIAALMTD LASTVLTQEA
LWEEQLVVAL PEDHPLAAKP ALDWGDVASL RVILWTSPGG SADGGVLYEI GGRAIECERH
AVSRTTLLEM VAMGLGATIA CESAVALCTG VIYRPIEDEN ALAVIEAIWP TSDGNPLRHR
LLTDIRRCAA SRAMSAPA
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