Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0140 |
Symbol | |
ID | 5196859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 135024 |
End bp | 136370 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640579679 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001260649 |
Protein GI | 148553067 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.398154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTTG CCGATCTCGG CCTTTCTGAC GAACTCCTCC GTGCGGTCTC GGAGGCCGGC TATAGCGAGC CGACCCCGAT CCAGGCGCAG GCGATCCCTC CCGTCCTGAT GATGAAGGAC CTGATCGGCA TCGCCCAGAC GGGGACGGGC AAGACCGCCA GCTTCGTGCT GCCGATGATC GACATCCTCG CGCATGGCCG CAGCCGCGCG CGCATGCCGC GCTCGCTGAT CCTGGAGCCG ACCCGCGAAC TCGCCGCGCA GGTGGCCGAG AATTTTGAGA AATATGGTAA ATATCATAAA CTTACCATGG CTCTCCTGAT TGGTGGTGTG AACATGGGCG ATCAGGTCGC CGCGCTCGAG AAGGGCGTCG ACGTGCTGAT CGCGACCCCG GGCCGCCTGA TGGACCTGTT CGGCCGCGGC AAGATCCTGC TGACCGGGTG CAGCCTGCTC GTCATCGACG AGGCGGACCG GATGCTCGAC ATGGGCTTCA TCCCCGACAT CGAGGAGATC TGCACCAAGC TGCCCGCGCA GCGGCAGACG CTGCTCTTCT CGGCGACGAT GCCCGCGCCG ATCAAGAAGC TGGCCGACAA ATTCCTGTCG AACCCCAAGC AGATCGAGGT GTCGCGGCCG GCGAGCACCA ACCTCGCCAT CGACCAGTCG CTGGTCGAAA CGTCGAGCCG GGCGAAGCGC GAGACGCTGC GCGGCCTGCT CAACGGCGGG GATGTGTCGA CCGCGATCAT CTTCTCGAAC CGCAAGACCA CGGTGCGCGA CCTCGCCCAG AGCCTCGGCC GTTACGGCTT CAGGGCCGGG CAGATCCACG GCGACATGGA GCAGCCCGAG CGGCTGCGCG AGCTCGACCG CTTCAAGGGC GGGGAGATCA ACATCCTCGT CGCCTCCGAC GTCGCGGCGC GCGGGCTCGA CATCAAGGGC GTCAGCCACG TCATCAACTT CGACGTGCCC TGGCACCCCG ACGACTATGT CCACCGCGTC GGCCGCACCG GCCGCGGCGG CGCGACCGGC ACCGCGATCA CGCTGGTGAC GCCCGAGGAC GCCGAAGCGA TCGAGGCGAT CGAGAAGCTG ACCGGCAACA AGATCGCCCG GCGCGGCAAG CCGGCCGGCG CGATCGAGGA GGCGGCCCCG GAAACGGCCG AGCCGCGGCG CGAGAAGCGC GAGCGGGGCG GACGCCGCGA GAAGAAGGCC GAAGTGCCCG CGCCGCGCGA GGCGAAGCGC GAGGAGCGCG ACCGTCGCCC GCGCCGCGAC GACCGCCGTC GCGACCCCAT CGACGACGAG CCCGACGACG GCTGGAACGG CCCGGTGCCG GGCTTCCTGA GCGTCAGCCT GGGCTAA
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Protein sequence | MSFADLGLSD ELLRAVSEAG YSEPTPIQAQ AIPPVLMMKD LIGIAQTGTG KTASFVLPMI DILAHGRSRA RMPRSLILEP TRELAAQVAE NFEKYGKYHK LTMALLIGGV NMGDQVAALE KGVDVLIATP GRLMDLFGRG KILLTGCSLL VIDEADRMLD MGFIPDIEEI CTKLPAQRQT LLFSATMPAP IKKLADKFLS NPKQIEVSRP ASTNLAIDQS LVETSSRAKR ETLRGLLNGG DVSTAIIFSN RKTTVRDLAQ SLGRYGFRAG QIHGDMEQPE RLRELDRFKG GEINILVASD VAARGLDIKG VSHVINFDVP WHPDDYVHRV GRTGRGGATG TAITLVTPED AEAIEAIEKL TGNKIARRGK PAGAIEEAAP ETAEPRREKR ERGGRREKKA EVPAPREAKR EERDRRPRRD DRRRDPIDDE PDDGWNGPVP GFLSVSLG
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