| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0140 |
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| Symbol | |
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| ID | 5196859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 135024 |
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| End bp | 136370 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579679 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001260649 |
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| Protein GI | 148553067 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.398154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG CCGATCTCGG CCTTTCTGAC GAACTCCTCC GTGCGGTCTC GGAGGCCGGC
TATAGCGAGC CGACCCCGAT CCAGGCGCAG GCGATCCCTC CCGTCCTGAT GATGAAGGAC
CTGATCGGCA TCGCCCAGAC GGGGACGGGC AAGACCGCCA GCTTCGTGCT GCCGATGATC
GACATCCTCG CGCATGGCCG CAGCCGCGCG CGCATGCCGC GCTCGCTGAT CCTGGAGCCG
ACCCGCGAAC TCGCCGCGCA GGTGGCCGAG AATTTTGAGA AATATGGTAA ATATCATAAA
CTTACCATGG CTCTCCTGAT TGGTGGTGTG AACATGGGCG ATCAGGTCGC CGCGCTCGAG
AAGGGCGTCG ACGTGCTGAT CGCGACCCCG GGCCGCCTGA TGGACCTGTT CGGCCGCGGC
AAGATCCTGC TGACCGGGTG CAGCCTGCTC GTCATCGACG AGGCGGACCG GATGCTCGAC
ATGGGCTTCA TCCCCGACAT CGAGGAGATC TGCACCAAGC TGCCCGCGCA GCGGCAGACG
CTGCTCTTCT CGGCGACGAT GCCCGCGCCG ATCAAGAAGC TGGCCGACAA ATTCCTGTCG
AACCCCAAGC AGATCGAGGT GTCGCGGCCG GCGAGCACCA ACCTCGCCAT CGACCAGTCG
CTGGTCGAAA CGTCGAGCCG GGCGAAGCGC GAGACGCTGC GCGGCCTGCT CAACGGCGGG
GATGTGTCGA CCGCGATCAT CTTCTCGAAC CGCAAGACCA CGGTGCGCGA CCTCGCCCAG
AGCCTCGGCC GTTACGGCTT CAGGGCCGGG CAGATCCACG GCGACATGGA GCAGCCCGAG
CGGCTGCGCG AGCTCGACCG CTTCAAGGGC GGGGAGATCA ACATCCTCGT CGCCTCCGAC
GTCGCGGCGC GCGGGCTCGA CATCAAGGGC GTCAGCCACG TCATCAACTT CGACGTGCCC
TGGCACCCCG ACGACTATGT CCACCGCGTC GGCCGCACCG GCCGCGGCGG CGCGACCGGC
ACCGCGATCA CGCTGGTGAC GCCCGAGGAC GCCGAAGCGA TCGAGGCGAT CGAGAAGCTG
ACCGGCAACA AGATCGCCCG GCGCGGCAAG CCGGCCGGCG CGATCGAGGA GGCGGCCCCG
GAAACGGCCG AGCCGCGGCG CGAGAAGCGC GAGCGGGGCG GACGCCGCGA GAAGAAGGCC
GAAGTGCCCG CGCCGCGCGA GGCGAAGCGC GAGGAGCGCG ACCGTCGCCC GCGCCGCGAC
GACCGCCGTC GCGACCCCAT CGACGACGAG CCCGACGACG GCTGGAACGG CCCGGTGCCG
GGCTTCCTGA GCGTCAGCCT GGGCTAA
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| Protein sequence | MSFADLGLSD ELLRAVSEAG YSEPTPIQAQ AIPPVLMMKD LIGIAQTGTG KTASFVLPMI
DILAHGRSRA RMPRSLILEP TRELAAQVAE NFEKYGKYHK LTMALLIGGV NMGDQVAALE
KGVDVLIATP GRLMDLFGRG KILLTGCSLL VIDEADRMLD MGFIPDIEEI CTKLPAQRQT
LLFSATMPAP IKKLADKFLS NPKQIEVSRP ASTNLAIDQS LVETSSRAKR ETLRGLLNGG
DVSTAIIFSN RKTTVRDLAQ SLGRYGFRAG QIHGDMEQPE RLRELDRFKG GEINILVASD
VAARGLDIKG VSHVINFDVP WHPDDYVHRV GRTGRGGATG TAITLVTPED AEAIEAIEKL
TGNKIARRGK PAGAIEEAAP ETAEPRREKR ERGGRREKKA EVPAPREAKR EERDRRPRRD
DRRRDPIDDE PDDGWNGPVP GFLSVSLG
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