| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0126 |
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| Symbol | |
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| ID | 5198808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 121823 |
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| End bp | 124138 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579665 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001260636 |
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| Protein GI | 148553054 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCT TCGCCCGCGA ACTCGAACAG ACGCTGCACA ACGCGCTGAG CGCCGCCAGC
AGCCGGCGCC ACGAATATGC GACGCTGGAG CACCTGCTCC TCGCGCTGAT CGCGGACGAG
CATGCGTCGA AGGTGATGAC CGCCTGCGGC GTCGACCTGA GCGAGCTGCG CAACGCGGTC
ACCAACTATC TCGACACCGA GCTCGACGCG CTCAAGGTCG AGGGCGAGAC CGATCCCTCG
CCCACCAGCG GCTTCCAGCG GGTCGTGCAG CGCGCGATCC TGCACGTCCA GTCGTCGGGC
CGCGAGGAGG TGACCGGCGC CAACGTCCTC GTCGCGCTGT TCAGCGAGCG CGAGAGCTAC
GCCGTCTTCT TCCTGCAGCA GCAGGACATG AGCCGCCTCG ACGCGGTCAG CTACATCAGC
CACGGCGTCG GCAAGGCCGG CCAGCCCACC GAGCAGCGCG AGGTCAAGGG CGCCGAGGAG
GAGAAGGCGC AGGCCAAGGC CGACGGCAAG AAGGGCGAGA GCGCGCTCAA GCAGTTCTGC
GTCAACCTCA ACGAGAAGGC CAAGAACGGC AAGGTCGATC CGCTGATCGG CCGCGGGCCC
GAGGTCGACC GCACCGTCCA GATCCTGTGC CGCCGGTCGA AGAACAACCC GCTCTATGTG
GGCGATCCCG GCGTCGGCAA GACCGCGATC GCGGAAGGGT TGGCGCGCAA GATCGTCGAG
GGCGACGTTC CCGAGGTGCT GCTGCCGGCG GTGATCTACT CGCTCGACAT GGGCGCGCTG
CTCGCCGGCA CCCGCTATCG CGGCGATTTC GAGGAGCGGT TGAAGCAGGT CGTGACCGAG
CTGGAAAAGC TGCCCCACGC GGTGCTGTTC ATCGACGAGA TCCACACCGT GATCGGCGCG
GGCGCCACCT CGGGCGGCGC GATGGACGCG TCGAACCTGC TCAAGCCGGC GCTGTCGGGC
GGCACGATCC GCTGCATCGG ATCGACCACC TACAAGGAGT TCCGCAACCA TTTCGAGAAG
GACCGCGCCC TGCTGCGCCG GTTCCAGAAG ATCGACGTCA ACGAGCCGAC GATCGAGGAC
ACGATCAAGA TCATCACCGG CCTGCGCTCG GCGTTCGAGG AGCATCACAA CGTCAAGTAC
ACGCCCGACG CGATCAAGGC CGCGGTCGAG CTGTCGTCGC GCTACATCAG CGACCGCAAG
CAGCCCGACA AGGCGATCGA CGTGATCGAC GAGGTCGGCG CCTCGCAGAT GCTGGTGCCG
CCGAACAAGC GCAAGAAGGT GATCACGCCC AAGGAGATCG AGGCCGTTAT CGCGACGATG
GCGCGCATCC CGCCGAAATC GGTGTCGACC GACGACAAGA AGGTGCTCGG CACGCTCGAG
ACCGACCTGA AGCGCGTCGT GTTCGGCCAG GACAAGGCGA TCGAGGTGCT CAGCTCGGCG
ATCAAGCTGA GCCGCGCGGG CCTGCGCGAT CCCGACAAGC CGATCGGCAA CTATCTGTTC
TCGGGCCCGA CCGGCGTCGG CAAGACCGAG GTCGCGCGCC AGCTCGCCTC GATCCTGGGC
ATCCCGCTCC AGCGCTTCGA CATGTCCGAA TATATGGAGC GCCATTCGGT CAGCCGGCTG
ATCGGCGCGC CTCCGGGCTA TGTCGGCTAC GACCAGGGCG GCCTGCTGAC CGACGCGGTC
GACCAGCATC CGCACAGCGT GCTGCTGCTC GACGAGATCG AGAAGGCGCA TCCGGACCTG
TTCAACATCC TGCTGCAGGT GATGGACAAC GGCAAGCTGA CCGACCACCA CGGCAAGACG
GTCGACTTCC GCAACACCAT CCTGATCATG ACCACCAACG CCGGCGCGTC CGACATGGCG
CGCGAGACGC TGGGCTTCGG CAACCTCACC CGCGAGGGCG AGGACGAGGA AGCGGTCAAG
AAGATGTTCA CGCCGGAGTT CCGCAACCGC CTCGATGCGA TCGTCCCGTT CAGCTATCTG
CCGGCCGAGG TCGTCGCGCG GGTCGTCGAG AAGTTCATCC TCCAGCTCGA GCTGCAGCTC
GCCGACCGCG ACGTGCACAT CAGCCTCGAC GAGGAGGCCC GGAACTGGCT GACCGCCAAG
GGCTATGACA AGCTCTACGG CGCCCGCCCG ATGGGCCGCC TGATCCAGGA GAAGATCAAG
CAGCCGCTGG CCGAGGAGCT GCTGTTCGGC AAGCTCGTCC ATGGCGGCGA GGTGAAGGTC
AAGCTCAAGG ACGACGCGCT GTCCTTCGAG ATCGTCCCCG CCGCGCCGAA GCGCCCGAAG
AAGGGCGGGG GCGCCAAGCC CAGGGTCAAG GCCTGA
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| Protein sequence | MPSFARELEQ TLHNALSAAS SRRHEYATLE HLLLALIADE HASKVMTACG VDLSELRNAV
TNYLDTELDA LKVEGETDPS PTSGFQRVVQ RAILHVQSSG REEVTGANVL VALFSERESY
AVFFLQQQDM SRLDAVSYIS HGVGKAGQPT EQREVKGAEE EKAQAKADGK KGESALKQFC
VNLNEKAKNG KVDPLIGRGP EVDRTVQILC RRSKNNPLYV GDPGVGKTAI AEGLARKIVE
GDVPEVLLPA VIYSLDMGAL LAGTRYRGDF EERLKQVVTE LEKLPHAVLF IDEIHTVIGA
GATSGGAMDA SNLLKPALSG GTIRCIGSTT YKEFRNHFEK DRALLRRFQK IDVNEPTIED
TIKIITGLRS AFEEHHNVKY TPDAIKAAVE LSSRYISDRK QPDKAIDVID EVGASQMLVP
PNKRKKVITP KEIEAVIATM ARIPPKSVST DDKKVLGTLE TDLKRVVFGQ DKAIEVLSSA
IKLSRAGLRD PDKPIGNYLF SGPTGVGKTE VARQLASILG IPLQRFDMSE YMERHSVSRL
IGAPPGYVGY DQGGLLTDAV DQHPHSVLLL DEIEKAHPDL FNILLQVMDN GKLTDHHGKT
VDFRNTILIM TTNAGASDMA RETLGFGNLT REGEDEEAVK KMFTPEFRNR LDAIVPFSYL
PAEVVARVVE KFILQLELQL ADRDVHISLD EEARNWLTAK GYDKLYGARP MGRLIQEKIK
QPLAEELLFG KLVHGGEVKV KLKDDALSFE IVPAAPKRPK KGGGAKPRVK A
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