Gene Svir_39570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39570 
Symbol 
ID8389278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand- 
Start bp4283342 
End bp4283938 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content68% 
IMG OID644977967 
Producthypothetical protein 
Protein accessionYP_003135726 
Protein GI257057894 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.336935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGAT GGGATCATGG CCTTGTGAGA GCGGACGCCC AGGTGGAACC GGGAACACTG 
TTGGTCGCTG CCCCCACGAT GTTCGATCCC AATTTCCGCC GGACGGTGGT GTTCGTGATC 
GACCACCGTG CCGAGGGCAC TCTCGGGGTC GTGTTGAACC GGCCCAGTGA AGTGGCGGTG 
CGCGAGGTAC TGCCGCGCTG GGGTGACCAC GTCGCCGAAC CCCGGTCGGT GTTCGTGGGT 
GGGCCGGTGG AGAAGAAGAC GGCGTTGTGC CTGGCCGCGT TGCGCACAGG GGAGACCGCG 
GCGACCGTGC CCGGAGTGAT CGGAGTGCGC GGCCCGGTGG CGCTCGTGGA TCTCGACTCC 
GACCCTGAGA TGCTGGCCAG CAAGGTGCGG GGACTGCGGG TCTTCGCCGG TTACGCCGGT 
TGGGACGGAG GCCAGCTGGC GAGCGAGATC GAGCGTGGTG ACTGGCTGAT CGTGCCCGCG 
TTGCCGAGTG ACGTGATGGC CGGTCCGACC CGCGATCTGT GGGGCCACGT GCTGCGTAGG 
CAAGGTCTGC CCACGGCACT GCTCGCCACC CACCCAGGCG ATCTTCAACG CAACTGA
 
Protein sequence
MRGWDHGLVR ADAQVEPGTL LVAAPTMFDP NFRRTVVFVI DHRAEGTLGV VLNRPSEVAV 
REVLPRWGDH VAEPRSVFVG GPVEKKTALC LAALRTGETA ATVPGVIGVR GPVALVDLDS 
DPEMLASKVR GLRVFAGYAG WDGGQLASEI ERGDWLIVPA LPSDVMAGPT RDLWGHVLRR 
QGLPTALLAT HPGDLQRN