| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38070 |
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| Symbol | |
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| ID | 8389128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4127909 |
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| End bp | 4128430 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977818 |
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| Product | RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family |
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| Protein accession | YP_003135578 |
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| Protein GI | 257057746 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.741976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCACC ATGACGATCA GGAGTTCACG GAGTACTTCA CCGCGAAGCG GGACTCCGTG
CGCCGGACGG CTTATCTGCT GTGTGGGGAC TGGCACCGTG CCGACGACCT CGCGCAGACG
GCGTTCGTGG CGCTGCACCG CAAGTGGCGC AAGATCCGCG ACCGCGGGGC CGTGGACGCG
TACGTGCGGA AGACACTGGT GCGCGCGGCC ATCGACGAGT CACGGCGACC GTGGCGGAGG
GAGCGGCACA CCGACGAGGT CCCCGAAACC GCGGTGCCGG GCACGGGCGG CGGGGACTCG
TTGGCCGAGG CCGTCAGCAC ACGCGCCGAC CTGCTCGCCG GACTCGCCCG GGTGCCGCCG
AAGCAACGTG CCGTGCTGGT GCTGCGCTAC TTCGAAGGGC TCGACGTGGC CAGTGTGGCG
CGGGTCCTCG GCTGTAGCGA AGGCAACGTG AAAAGCCAGA CGTCGCGGGG GTTGGCGAAT
CTGCGGGCCG TGCTGGGTGA GGAGGTGGAC ACACGTGGAT GA
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| Protein sequence | MAHHDDQEFT EYFTAKRDSV RRTAYLLCGD WHRADDLAQT AFVALHRKWR KIRDRGAVDA
YVRKTLVRAA IDESRRPWRR ERHTDEVPET AVPGTGGGDS LAEAVSTRAD LLAGLARVPP
KQRAVLVLRY FEGLDVASVA RVLGCSEGNV KSQTSRGLAN LRAVLGEEVD TRG
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