| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37690 |
|---|
| Symbol | |
|---|
| ID | 8389090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 4092159 |
|---|
| End bp | 4092596 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644977780 |
|---|
| Product | thiol-disulfide isomerase-like thioredoxin |
|---|
| Protein accession | YP_003135540 |
|---|
| Protein GI | 257057708 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.173246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTGA CCGGACTGTG GGTGCTGGTG GCAACGCTCG TGGCGGGCGT GCTCACCGGT
GGACTGCTGC GGTCCCGCCA GGGGAGGGTG CGGCGCAGCG CCGAGGAGGC CACCGGGCCC
CCCTCCCTAC CGGGACCCGT GTCCGACGCG CTCGTGGCCG ACGCCGTCAC CCTCGTGCAG
CTGTCCACCA CGTTCTGCGC ACCGTGTCGA CATGCCCGAG CCGTACTGGC GAGGGTCGCC
GAGACCACCG ACGGTGTCGC GCACGTGGAA CTCGACATCA CCGACCGACC GGAGGTGGCG
GAGGCGCTGC GGGTGCTGCG CACGCCCACC ACGATCGCGT TCGATCCGAC GGGTAGGGAG
CTGCTGCGGA TCAGCGGCGT GCCGAAACCG GCCACACTAC GCACGGCACT GGCCCCTCAC
ATACGTCCCA CAGAATGA
|
|---|
| Protein sequence | MSVTGLWVLV ATLVAGVLTG GLLRSRQGRV RRSAEEATGP PSLPGPVSDA LVADAVTLVQ
LSTTFCAPCR HARAVLARVA ETTDGVAHVE LDITDRPEVA EALRVLRTPT TIAFDPTGRE
LLRISGVPKP ATLRTALAPH IRPTE
|
|---|
| |