Gene Svir_37680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37680 
Symbol 
ID8389089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4091317 
End bp4092129 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID644977779 
Producthypothetical protein 
Protein accessionYP_003135539 
Protein GI257057707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0858561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCA TCGTGATCGT CCTGGTCGTG CTGGTGGGCC TGCTGGTGGG CGCCGATTTC 
GGGGCGGCCA CGTTCGCCGA ACACACGGTG TCCCAGAAAG CGCGTGAACA ACTCGGGTTG
GATCAGGACC CCGCGGTGTC GATTCACGGC TTTCCGTTCA CGCTCCAAGC GATTTCCGGC
GAATACGATC ACATCAGCAT CACCGCCGAC GGAGTGCGTG TCCAAGAACT GCAGGACATC
TCCGTGCGGG CCAATCTGCA CGACGTGAAA GCACCGATGT CCGATCTCAC CTCGGGCAAC
GTCGACAACA TCAAGATCGG TCGGCTCGTG GGTGAGATCA CGCTGAAGGC GAGCGACATC
GCCCGCGTCG CCCCGTTGAC CAACATCGAC GATCTCCGCA TCGAACCGTC GTCGAAGGCG
TACGTGCTCC ACGGCGAGGG TGTCGACGAG GAGAAGGCCG CGGAGATCGA GGAGAGCGGT
GACGACTCCA CGGCGGGTGT GCGCCTGTCC GGCAAGGCCG ACGTCGCGGG CGAGCGCATC
GAGATCTTCG CCTTCGCCAT GATCGAGCTG GACGGGACCA CGATCCGGAT CACGCCGCAC
CGACTGCAGT TCGGCAACGA CAAGGAGACC ACCGTCGTCC CCGAAGAGGT CCAACAGGCG
TTGCTGCCGA ACTTCGAGGC CGACATCAAC GCCGGGGACA TGCCGTTCAC GGTGACCCCC
ACCGCGATCC ATGTCGCCTC CGGCTCGCTG ACCCTGCACG GCGAGGCCGA GAACGTCACG
TTCGCCGGCG TCTCCGACAC GTTCGGCGGC TGA
 
Protein sequence
MKRIVIVLVV LVGLLVGADF GAATFAEHTV SQKAREQLGL DQDPAVSIHG FPFTLQAISG 
EYDHISITAD GVRVQELQDI SVRANLHDVK APMSDLTSGN VDNIKIGRLV GEITLKASDI
ARVAPLTNID DLRIEPSSKA YVLHGEGVDE EKAAEIEESG DDSTAGVRLS GKADVAGERI
EIFAFAMIEL DGTTIRITPH RLQFGNDKET TVVPEEVQQA LLPNFEADIN AGDMPFTVTP
TAIHVASGSL TLHGEAENVT FAGVSDTFGG