Gene Svir_37420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37420 
Symbol 
ID8389063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4062518 
End bp4063735 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID644977753 
Productbiotin carboxylase 
Protein accessionYP_003135514 
Protein GI257057682 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.442231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGGCG GCGCTGACGG CTCCGTCAAC GTCTACCGCC GGGCGCGGGA ACTCGGGTAC 
CACACCATTT GCGTCGACAT CAGACCCAAC GCCCCCGGCG TGGCCGTGGC GGACGAATAC
CTGCAGCTCA GTGTGCGGGC ACCGGAGCGG ATCGACTCGG CACTGGGCTC CCGCACCGAC
ATCGCCGGGG TGATCTGTCC CGCCAGCGAC GTCGGGCTTC CGACGCAGGC ATGGTTGGCG
AAGAAGTGGG GCCTGCCCTC TCCCCTGCCT CCCGCCGCCG TCGAGGCGTC CGTGGACAAG
CCGGTGTTCC GCTCGGTGTG TGAACGCGCA GGCGTCCCCA CCTACCGCAG CGTCTCGGGT
TCCTCGGGGG AGGAACTGGT GGAGGCGGCC CGCCACCTCC GTTTCCCGGC GCTGGTGAAA
CCCGTGGACT CGTCCGGCAG CCGTGGGGTC GTCTCGTGCG CGGACCCCGG CAAACTCCGC
TCGGCGGTGG CCGAATCGTT GACGTTCTCC CATCGGGGAC GCGTGGTCGT CGAGGAACAC
CTGGACGGCC GACACCTGAC GATCGAGGCG CTGGTCGTGG ACGGCGAGAT CGTGTTCCAC
GCCGTCACCG AACGCACCAT CACGCCACCG CCGCTGTTCG TCACCACGGC CCACCTGATG
CCCGTCGAAC TCCCCGCCGA GGTCGCCGCG GCACTGCCCG ACATGCTGGC CGCCGTGTGC
GCGGAACTCG GCTACCGCAC CGGGCCGCTG ACGTTCGACG CCGTCCTCGG CCGCGACGGC
AAGCTGTACC TGATCGAGAT GGGTGCCCGC ATGGGCGGCA ACGGCATCGC CGAAGTGGTG
GAGAGCTGCT ACGGCGTGGA CCTCATGGCG GCCACCATGT CGCTCGCCGT GGGCGAGCAG
CCGACGATCG TCAGCAAACC ACCCACGCCG ACACTGGTGC ACATCCTCGC CTCAGACCGC
ACGGGACGTC TCTGCGGCAT CGACGGTGTC GACGAGGTGC GCGCCATGCC GGAAGTGCTC
GCACTGCACC TGTTCGTCCA CGAAGGAGAC CTCGTCCGTC CCTACGAACA GGCGGGCCAC
AAGCTCGGAT ACGTCGTCGT GTCCGCCGAG TCGGTGGACC GACTGTGGGC GGCCGAAAGC
GCGGTGCGCG GCACCCTGAA GTTCCGCCTG GCCAACCAGG GCGACGGCGA ACAGGATCTG
GCGGTGCCTC TCCCTTGA
 
Protein sequence
MLGGADGSVN VYRRARELGY HTICVDIRPN APGVAVADEY LQLSVRAPER IDSALGSRTD 
IAGVICPASD VGLPTQAWLA KKWGLPSPLP PAAVEASVDK PVFRSVCERA GVPTYRSVSG
SSGEELVEAA RHLRFPALVK PVDSSGSRGV VSCADPGKLR SAVAESLTFS HRGRVVVEEH
LDGRHLTIEA LVVDGEIVFH AVTERTITPP PLFVTTAHLM PVELPAEVAA ALPDMLAAVC
AELGYRTGPL TFDAVLGRDG KLYLIEMGAR MGGNGIAEVV ESCYGVDLMA ATMSLAVGEQ
PTIVSKPPTP TLVHILASDR TGRLCGIDGV DEVRAMPEVL ALHLFVHEGD LVRPYEQAGH
KLGYVVVSAE SVDRLWAAES AVRGTLKFRL ANQGDGEQDL AVPLP