Gene Svir_37410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37410 
Symbol 
ID8389062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4061529 
End bp4062503 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID644977752 
Productglycosyl transferase 
Protein accessionYP_003135513 
Protein GI257057681 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0782331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.765571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC GCACGAACTA TCCCGACGAA ACCGGGCTGA CAGTCGTCAT CCCCTGCTAC 
AACGAGGTCG ACAACCTCAA GCACTCCTAC GACGAGGTCG TCTCCGAACT CGGTGAGTTC
GACCTGGAAC TGCTCTACGT CGACGACGGC AGCACCGACG GGAGCCTCGA CGTCATCCGA
GAACTGGCCG CGGCCGACAG CCGGGTGCAG TACCTGTCGT TCACCCGGAA CTTCGGCTTC
GAGGCCGCCT TCTCGGCCGG CTACCGCTAC GCGAGCAAAC CGTGGATCCT GCACGTGGAC
GCCGACCAAC AGTTCCCCGC CGCCGAGGCG CACAAACTGA TCGCGGCCGC CAAGTCCGGA
TACGACGCGG TGTTCGGAGT ACGGACCAAC CGGCAGGACC CACTGTTACG CCGATGGGGC
ACGGCCGCGT TCCATTTCAT CGGACGTCGA CTGCTGCGGA TCGAACTCCC CCAGGGCGCC
ACGGCTTTCC GCCTGGTCCG CACCGAACTC GCCAAGCGGA TCGTCGACCT GAACCTCGGC
ACCCCGTACT TCCTGGCCAC CGTCCCACGC CTGACCAACC GCTACACGAC CGTGCCCGTG
GCACACCGGG CGCGGCAGCG CGGTGAGTCC AAAGTGGGGA TGAGTTTCCT CTCCTCCCAC
GCCATCGAGC TGTTCGTCGG ATTCAGTCGT CGACTCAGTA CGGCGGCGTC GGTCTCGTGT
CTGCTGGCGG GCGGCCTGGC CCTGCTGCTC GCCATCGCGG GCGCCACGGG ACTCGTGACC
GGCGCTCCCC TGCTCGTCGC GCTGCTCGTC CTACTCGCCG TGGCGTTGGT GACGCTGTCG
TTGACCGTGC GTTCGCTCGT CGTCGTGAAC GCCGGACAAC CGCGTCCCCG ACTGTTCTAC
ATCAGGGAGG CCAGCATCCC CGTGGACGAC GCCGACAGGT TGCTCAGCAC GTCACCGACC
TTGGAAACCG TATGA
 
Protein sequence
MTERTNYPDE TGLTVVIPCY NEVDNLKHSY DEVVSELGEF DLELLYVDDG STDGSLDVIR 
ELAAADSRVQ YLSFTRNFGF EAAFSAGYRY ASKPWILHVD ADQQFPAAEA HKLIAAAKSG
YDAVFGVRTN RQDPLLRRWG TAAFHFIGRR LLRIELPQGA TAFRLVRTEL AKRIVDLNLG
TPYFLATVPR LTNRYTTVPV AHRARQRGES KVGMSFLSSH AIELFVGFSR RLSTAASVSC
LLAGGLALLL AIAGATGLVT GAPLLVALLV LLAVALVTLS LTVRSLVVVN AGQPRPRLFY
IREASIPVDD ADRLLSTSPT LETV