| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36980 |
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| Symbol | |
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| ID | 8389019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4021617 |
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| End bp | 4023071 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977710 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_003135474 |
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| Protein GI | 257057642 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.037708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAC GCGAGGTCAT CGAGCGGGTT CCGAAACAGT TGTTCATCGG AGGTACCTGG
CGTGATTCCG ACGACGGCGT GTTCGAGGTG TACGACCCCG GCAACGGTTC CCGGCTGTGC
GAGGTCGCCG ACGGACGGGG GACCGACGCG GAGGCCGCCG TCGAGGCCGC CGTCGCGGCG
CAGGACACCT GGGCCGCCAC GCCGCCCAGG GAACGCGGGG AGATCCTGCG CCGCGCCTGG
CGACTGATGA TCGACCGGGC CGACGACCTC GCGTTGCTCA TGACGTTGGA GATGGGCAAG
AGCCTCACCG AGTCCCGCGC CGAGGTCGTC TACGCCGCCG AGTTCTTCCG GTGGTTCTCC
GAGGAGGCGG TGCGCATCGA CGGCGTCTAC AAACGCGCTC CGGACGGTGG CGGGCGCATG
ATCGTCACCC GCCAACCCGT CGGTCCCTGT CTGTTGATCA CACCGTGGAA CTTCCCGCTC
GCCATGGGCA CCCGCAAGAT CGGCCCCGCG GTCGCGGCGG GCTGCACGAT GATCGTCAAA
CCGGCGCAGC TCACGCCGCT GTCGATGCTC GCCCTGGCCG ACCTGCTCGT CGAGGCGGGA
CTGCCCGGCG GTGTGCTGAA CGTCGTACCG AGCACCTCGG CCAGCAGCAT CACAAGCCCC
GTACTCGCCG ACCCCCGCGT GCGGAAACTG TCGTTCACCG GGTCCACAGA GGTCGGTCGC
AAGCTCGTGG CACAGTGCGC ACCGAATCTC CAGCGCATGT CCATGGAACT CGGCGGGAAC
GCTGCTTTCC TCGTCTTCGA CGACGCCGAC CTCGACACCG CCGTGGCCGG GGCGGTGACC
GCGAAGATGC GCAACAACGG CGAATCCTGC GTGGCGGCCA ACCGCTTCCT CGTGCAGTCC
TCGATCGCCG AGGAGTTCAC CGAACGGCTC ACCGAACGGA TGGCGGGGTT GCACATGGGG
CACGGCACGG AACCGAACGT CACCGTCGGA CCGCTCATCG ACGAGACGCA ACGGGACAAG
GTGTCCGAAC TGGTCACGGA CGCGGTCGGA CGTGGCGCAC GGGCGACCAC AGGGGGAGGT
CCCGCGGAAC GGGACGGGTA CTTCTACCAC CCCACGGTGC TCGCCGACGT GCCCGTGGAC
GCCCGCATCC TGGAGGAGGT CTTCGGACCG GTGGCCCCGG TGACGACGTT CGACACCGAG
GAGGAGGCAC TCCGCAAAGC CAACGACACC GAGCACGGGC TGGTGGGTTA CGTGTTCACC
CGCGACCTGG ATCGCGCGGT GCGGGTGGGG GAAGGGCTGG CCACCGGCAT GGTCGGTCTC
AACACCGGAC TGGTGTCCAA CGCGGCGGCC CCGTTCGGCG GGGTGAAGGC GTCCGGCTTC
GGTCGCGAGG GCGGCGACGA GGGCATCGAG GAATACCTCG ACACGAAGTA CCTGGCCTTG
GCCCTGAGCT CATGA
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| Protein sequence | MDEREVIERV PKQLFIGGTW RDSDDGVFEV YDPGNGSRLC EVADGRGTDA EAAVEAAVAA
QDTWAATPPR ERGEILRRAW RLMIDRADDL ALLMTLEMGK SLTESRAEVV YAAEFFRWFS
EEAVRIDGVY KRAPDGGGRM IVTRQPVGPC LLITPWNFPL AMGTRKIGPA VAAGCTMIVK
PAQLTPLSML ALADLLVEAG LPGGVLNVVP STSASSITSP VLADPRVRKL SFTGSTEVGR
KLVAQCAPNL QRMSMELGGN AAFLVFDDAD LDTAVAGAVT AKMRNNGESC VAANRFLVQS
SIAEEFTERL TERMAGLHMG HGTEPNVTVG PLIDETQRDK VSELVTDAVG RGARATTGGG
PAERDGYFYH PTVLADVPVD ARILEEVFGP VAPVTTFDTE EEALRKANDT EHGLVGYVFT
RDLDRAVRVG EGLATGMVGL NTGLVSNAAA PFGGVKASGF GREGGDEGIE EYLDTKYLAL
ALSS
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