| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36960 |
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| Symbol | |
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| ID | 8389017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4019347 |
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| End bp | 4021032 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977708 |
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| Product | putative exporter of polyketide antibiotics |
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| Protein accession | YP_003135472 |
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| Protein GI | 257057640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3559] Putative exporter of polyketide antibiotics |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0634645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTG ACGACGCGCG TACCCCGGCC GACTCCGGAA CACTTCGGAG TCCGAAATCG
ACCGGGGAAC CGTCCGAAAC GACCCCAACA GCGGGCAACC TCAGCGGTAC CGGACAGCTC
ATTCGCCTCG CACTGCGTCG CGATCGCCTG GTGCTGCCGC TGTGGATCGT CGTGGTGGTG
CTGCTGACCA CCGCCGGCGC GGGCGCCTAC GAACAGCTGT ACCCGGACCC GGCCGAGCGC
GCCGCGCTGA CGGCGAGCAT GGCGAACAAC CCCTCCATCA CCCTGCTGCT CGGCCCCGCC
TACGACCTGT CCACGGCGGG TGGCTTCACC GCCTGGCGTT TCGGCACGAT GCTGTCACTG
CTCCTCGCGC TGGTCTGTGT CTTCACCATG ACCAGACACA CGCGGCAGGA GGAGGAGACG
GGCAGGTACG AACTGCTGTC GTCCACCGTC GTCGGCCGCT ACGCCTTCCT CGCCGCGTCG
TCGGTGGTGT GCGCGGCGTT CGCGGCGCTC ACGGGACTGG CCACGGCGGC GGCGTTGATC
GCGGCGGGTA CGTCGGCATC CGGCGCGTTC GCGTTCGGTC TCGGATTGAC GTCGGTGGCG
TGGGTGTTCA CCGGTGTCGC GGCCGTCACC GCACAGCTGG CCGAGTACTC CAGGACCGCC
AACGGCCTGG CCGGAGCGGT GCTGGGTATC GCGTTCGCGG TGCGGGCCGT CGGCGACTCG
TCGGCGGAGG CCTCGTGGTT GTCGTGGTTG TCGCCGCTCG GCTGGGCCAC CCGGGTGCGC
CCGTTCGCCG GGGACCGGTT CTGGGTGTTG CTCATCCCCG TGGTCGTGAC CGCCGCCCTT
GCCGTCACCG CCTACCTGTT ACAACGCCGA AGGGATGTCG GGTTCGGACT GCTGCCCACC
CCGCTCGGCC CGGCCACCGC CGCACCCCGA CTGCGGACGC CGTTCGCCCT CGCCGTCCGT
CTGCACAGGG GGACACTGCT GGGCTGGGTC GCCGGTTTCG CGGTCCTGAG TGTGCTGTTC
GGTTGGCTGG CCTCCGATAT CGGCGACATC GTCGGTGACA ACGAGCGGAT GCGCGACATG
CTGGCCGAGC TGGGCGGCGG ACGAGGCATG GTCGACGCCT ACTTGGCCGC CACGGCGGAC
ATCTTCGGCA TGGTGGCCGC GCTCTTCGTG GTCCAGGCGA CGGTGCGGAT ACGCACGGAG
GAGACCGCGC TACGGGCCGA GCCGCTGCTG ACCACCGGTG TGTCCCGCTT GCGGTGGGTC
ACCGGTCATC TCGTGCTCGT CTTCGCGGGT GGGGCCGCGC TGTTGCTGGC GGCGGGTCTC
GGTATGGGAT TCGCGCACGG CGTGCGGGTG GGTGACGTCG GGGCACAGAC GCCCGACGTG
CTGCTGGCCT GTCTGTCGCA GATCCCCGCC GTGTTCGTCG TCGGCGGCGT GGCCGTGGTG
CTGTTCGGGC TCCTTCCCGC CCACACCGTT GGAGCGTGGG CGGTCGCCGC CGCGTTCCTC
CTGCTCAGCC TGTTCGGCCC GGTGTTGCAG TTGGACCAGG CGGTGTTGAA CGCCTCGCCG
TTCCAACATG TGCCACAGCT GCCGAGCGAG GACTTCACCG CGGCCCCGAT GCTGTGGTTG
ACGCTGGTGG CGGCCGGGCT GGTCACGGCG GGGGTCGTCG GGTTCCGACG TCGCGACCTC
GGGTAG
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| Protein sequence | MTGDDARTPA DSGTLRSPKS TGEPSETTPT AGNLSGTGQL IRLALRRDRL VLPLWIVVVV
LLTTAGAGAY EQLYPDPAER AALTASMANN PSITLLLGPA YDLSTAGGFT AWRFGTMLSL
LLALVCVFTM TRHTRQEEET GRYELLSSTV VGRYAFLAAS SVVCAAFAAL TGLATAAALI
AAGTSASGAF AFGLGLTSVA WVFTGVAAVT AQLAEYSRTA NGLAGAVLGI AFAVRAVGDS
SAEASWLSWL SPLGWATRVR PFAGDRFWVL LIPVVVTAAL AVTAYLLQRR RDVGFGLLPT
PLGPATAAPR LRTPFALAVR LHRGTLLGWV AGFAVLSVLF GWLASDIGDI VGDNERMRDM
LAELGGGRGM VDAYLAATAD IFGMVAALFV VQATVRIRTE ETALRAEPLL TTGVSRLRWV
TGHLVLVFAG GAALLLAAGL GMGFAHGVRV GDVGAQTPDV LLACLSQIPA VFVVGGVAVV
LFGLLPAHTV GAWAVAAAFL LLSLFGPVLQ LDQAVLNASP FQHVPQLPSE DFTAAPMLWL
TLVAAGLVTA GVVGFRRRDL G
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