Gene Svir_36190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36190 
Symbol 
ID8388940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3942757 
End bp3943212 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID644977634 
Productputative translation initiation inhibitor, yjgF family 
Protein accessionYP_003135401 
Protein GI257057569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA GCGCGAGGCT GACGGAGCTC GGCATCGAAC TGCCCGCCGT CGCGGCTCCG 
GTCGCGGCTT ACGTCCCGGC CGTGCGTACG GGTTCCTACG TCTACACCTC CGGACAGTTG
CCGTTCGTCG ACGGTGAGCT GGCGGCGACC GGCAAGGTCG GTGCCGAGGT CAGCCCGGAG
GAGGCCAAGC AGCACGCACG CACGGCCGTG TTGAACGCGC TCGCCGCCGT CCACGATCTC
GTCGGCATCG ACTCGGTGGT CCGGATCGTG AAGGTTGTCG GCTACGTGGC GTCGAGCGAG
GGGTTCGGGG GTCAGCCCGC CGTCATCAAC GGTGCCTCCG AAGTGTTGGG TGAGATCTTC
GGTGACGCGG GCGCGCACGC GCGGGCGGCC GTCGGGGTCG CCGAGCTGCC GCTGGGGGCA
CCGGTCGAGG TGGAGTTGAC CGTGGAGGTC GCGTGA
 
Protein sequence
MKWSARLTEL GIELPAVAAP VAAYVPAVRT GSYVYTSGQL PFVDGELAAT GKVGAEVSPE 
EAKQHARTAV LNALAAVHDL VGIDSVVRIV KVVGYVASSE GFGGQPAVIN GASEVLGEIF
GDAGAHARAA VGVAELPLGA PVEVELTVEV A