Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_36050 |
Symbol | |
ID | 8388926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3930542 |
End bp | 3931264 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977620 |
Product | uncharacterized membrane protein |
Protein accession | YP_003135387 |
Protein GI | 257057555 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.787149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.459993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGACA CCCCCAAACA GACCCACGCC GACGAACCAC ACGGCCTCAA CGTGAGCGGC AAGCTCAACT GGTTGCGGGC AGGCGTACTC GGCGCCAACG ACGGCATCGT GTCCACCGCC GGACTGGTGG TGGGTGTCGC GGGAGCAACA GCGGACCAGC ACACCATCCT GCTCGCCGGA CTCGCCGGGA TCGCGGCCGG AGCGTTGTCG ATGGCCGGCG GTGAGTACAC CTCGGTGTCG ACACAGCGCG ACACGGAACG CGCGCTGCTG CAACTCGAGC TGCACGAACT GCGCACGATG CCCGAGGAAG AGGAACGCGA GCTGGCACAG TTCTATGAAC TGAAAGGACT GTCGCCCCAC CTGGCGGCCC AAGTGGCGCG GGAACTCACC GAAAAAGACG CGCTACGCGC GCACGCCGAG GTCGAACTGG GCATCGACCC CGATCAACTG ACCAGCCCGT GGCATGCAGC ATGGGCCTCT CTGATCGCGT TCACCGCGGG CGCGTTGCTG CCGTTGCTGG CGATCCTGTT CTTCCCACCG GCAGCGAGAG TGCCCGCCAC AGGCGGCGCG GTCGCACTCG CCCTGGCTCT CACCGGCTGG GTGAGCGCCA GACTCGGCAG CGCACCCCCG GGGCGGGCCG CCGCCCGCAA CGTCGGAGTG GGATTGTTGA CAATGCTCGT GACGTACGCC GTGGGCCTCG TATCCGGTAC GGCGTTCGGA TAA
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Protein sequence | MSDTPKQTHA DEPHGLNVSG KLNWLRAGVL GANDGIVSTA GLVVGVAGAT ADQHTILLAG LAGIAAGALS MAGGEYTSVS TQRDTERALL QLELHELRTM PEEEERELAQ FYELKGLSPH LAAQVARELT EKDALRAHAE VELGIDPDQL TSPWHAAWAS LIAFTAGALL PLLAILFFPP AARVPATGGA VALALALTGW VSARLGSAPP GRAAARNVGV GLLTMLVTYA VGLVSGTAFG
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