| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35910 |
|---|
| Symbol | |
|---|
| ID | 8388912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3912215 |
|---|
| End bp | 3913063 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644977606 |
|---|
| Product | Flp pilus assembly protein TadB |
|---|
| Protein accession | YP_003135373 |
|---|
| Protein GI | 257057541 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.241771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGATCG CCGCGATGAC GGTGTCCGCG ATCGGTTTAC TGCTGTGGCC ATCGCGCGCC
GCGGGACAGC GACTCGCCCG ACTCCTCCGA CCCACCGTGT TTCCCAGCGG GCATCCGGAC
GACGGGGAAA TGGCACGGTC GACGGGACCC CACCGACGTT TCCTGACCGC TTTCGCCGTG
TGCGTGACGG TCGGTTGTGT CCTGACCGTC GGTATGGGTG CCACGGTGGG ATGCGGACTG
CTCGTGGCGG CGGTCGTATT GCACCGAAGG GCCCGGGTAC GTGCGCGAAC GACGGTCGCC
GTCTGCGGTG ATCTCGCATC GCTGCTTCGG GGAGTGGTCA CGGAACTGCG AGCCGGGGCC
CACCCGGTGA CCGCCGTCGA GAACGTGGCG AGGGAGGCTC CACGACCGTT GGCGGACCGA
CTGCGCGGAC TCGCCGCATC GGCGCGGTTC AGCGGTGTAC CCACGGCGGA ACCGGAGGTC
CGAGCCGCCT GCGGGCCGGG AATGGAACAC GTCGACCGCA TATTCGGACG ACTCGCCACG
TCGTGGGCGT TGTCGGCACG GCACGGCATT CCCTTGGCCG ATGTCTTCGA CGCCGTGCAC
CGGGACATGG AAACCACGGC CCGGTCGGCC CGGCAGCTCG ACGCGCGGTT GGCCGGTCCG
AGAGCGGGCG CGGCGGTGCT GGCCTTCCTC CCCGTGGCGG GTCTCGTCCT CGGCGAGGCC
ATGGGGGCCG CTCCGATCCC CGTGCTCATG GGGACCTCCG TCGGTTCCGT GCTGTTCGTC
GTAGGGGCCG CTCTACTCGT GGCCGGTGTC GCGTGGACCT CGTCGATGAC CGGGCGGGTG
CTCCAATGA
|
|---|
| Protein sequence | MLIAAMTVSA IGLLLWPSRA AGQRLARLLR PTVFPSGHPD DGEMARSTGP HRRFLTAFAV
CVTVGCVLTV GMGATVGCGL LVAAVVLHRR ARVRARTTVA VCGDLASLLR GVVTELRAGA
HPVTAVENVA REAPRPLADR LRGLAASARF SGVPTAEPEV RAACGPGMEH VDRIFGRLAT
SWALSARHGI PLADVFDAVH RDMETTARSA RQLDARLAGP RAGAAVLAFL PVAGLVLGEA
MGAAPIPVLM GTSVGSVLFV VGAALLVAGV AWTSSMTGRV LQ
|
|---|
| |