| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35790 |
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| Symbol | |
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| ID | 8388900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3897805 |
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| End bp | 3899733 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977594 |
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| Product | thymidylate kinase |
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| Protein accession | YP_003135361 |
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| Protein GI | 257057529 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.157442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGACT GGTTGTCGTT GTTGGCCCTG ACCGGTTTGG TCACGAAGTT CACCGACAAC
TACACGGCTC AGAACTTCGC TTTCGCCGGG GTCGTGTTGA CGCAGCTGCT TCCCGGCCTG
TTGTTCGCGC CACTCGGTGG GATGCTCGCG GACCGATTCG ACCGGCGCAA GATCATGATC
GTTGCGGATA TCGCGCGTTT CGGTCTGCTC ATTTCCATCG CGGTCGTGGG TACGCCGCTG
TGGTTGTTCA TCGGCAACTT CTTGGTCGGT TCCGCCGCCA TGATGTGGAT TCCGTCCAAG
GACGCCGCCG TGCCGAATCT GCTTCGCCGG CGGGATCAGG TGGAAACGGC GAATCAGCTC
GGCATGGTCA TGACCTACGG GGTTTCCGTC GTAACCGGTG CCGGCCTGTA CGCGGTCCTC
ACGGGTATCC AGACGACCTT CAACCTGCCG CCGAGCTTGT TGGGGGAATT CGGCACCGCC
AAGATCGTCG TCGTTCTCAA CGGCCTGTTG TACCTGGCCA GCGCGCTGCT GGTCGCCCGC
ATCCCCGAGC TCTCGCTGCG CAACGTCCAC CCGATGCCCG AGGCGAAGAC CGGTCAGGTC
AAGCGCGAGG CCGAGGAACA GTCGGGCGGC CTGCGCAGCA TGGTGCGGGA CGGTGTGCGG
TTCGTCCGGA GCACGCCGCT CGTCCGAGGG CTGCTCATCG GCATGATGGG GGCGTTCGCG
GCCGGTGGCG CGGTGATCGG CTCGGCCAAG CCGTACTCGT CGAGTCTCGG CGGTGGCGAT
GCCGCGTTCG GTCTGCTGTT CGTGGCCGTG TTCGTCGGGG CCGCCGTCGG TTTGGCCGGT
GCGCCGAAAC TGGCTCGCCG ACTGCCGCAC GAGCGGCTGT TCGGCGTCGG CATCGTGGCC
GCGGGACTGA CGCTCGTCGT GGTGGCTTTG GCGCCGCACC TCGCGGTGGC GCTCGTCGCC
GTCGCGCTCG TGGGCGCGTG CGCGGGCGCG GCGTTCCTCA CCGGCATCAC GATCATCGGC
TCGCAGATCG ACGACAGCAT CCGGGGCCGG ATCAACGCCA TCTACCAGTC GTTGATGAAG
ATCATCATCT TCGGCACGAC GTCAGCGGTG CCCGGTCTCA TCGGACTGGT GAAGCCCCGG
AGAGTCACCG TGTGGGGCAA CCAGATCATC ATCGACGGCA CCCGTCCCGT GCTGTTGGCC
GGTGGGCTGC TCGCCGCGTT GGTCGGGGTG ATCGCCTACC GGCAGATGGA CTCGCGACGC
GCCGAACCGA TCTTCGCCGA CCTTCGCAAC GTCATCCGCC GGCCGCGCAG GGAGAACGGC
CTGCTCATCG TGTTGGAGGG CACCACGGCG GCCGACACCG CCGCTCAAGC CGCGCACCTG
GCACAGTGGC TCGGCAGCGG CAGCCAGCGG GTGGTGCTGG CCGCGGACCC CGCGCTCGAC
GACGAACGAT TGACCTCCCT GATGTCCGGC GCGGCGCTCA CCGGGGCGAG AGCGAAGGCG
CTGGCCGCCG CGGCCGTCCG TGCCGACATC GTCGAACGCA ACGTGCGACC GGCCCTCGAC
GAGGGCGCGA TCGTGGTGAT GGAGAGGTTC GTGGACACCC CGCTGGCGCA TCTGTCGGCC
ATGGCGGGGC TCGACGCCAC GGAACTGGAG GGGCTCACCG ACTGGGCGAC CGGTGCGTTG
CGCCCCGACC TCACGGTGCT GCTCGACGCC GACCCCGGTG AGGCCTCCGA ACAGTCCACG
AGCACCGCCG AGCACCATTG GAGGGTGCAG GAGATATTGG CGGAAATGGC GGCTTCGGCC
CCCGACCGGT ACGTCGTCGT CGATGCCGAG GGCACCGAGG CCGAGGTCGC CGAACGGGTA
CGGGTGTCGG TTTCGGAGGC GTTGTCCGGA AAAGTCGCGT TGCCGCCCAC CACACAGGAG
GTGGCGTAG
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| Protein sequence | MADWLSLLAL TGLVTKFTDN YTAQNFAFAG VVLTQLLPGL LFAPLGGMLA DRFDRRKIMI
VADIARFGLL ISIAVVGTPL WLFIGNFLVG SAAMMWIPSK DAAVPNLLRR RDQVETANQL
GMVMTYGVSV VTGAGLYAVL TGIQTTFNLP PSLLGEFGTA KIVVVLNGLL YLASALLVAR
IPELSLRNVH PMPEAKTGQV KREAEEQSGG LRSMVRDGVR FVRSTPLVRG LLIGMMGAFA
AGGAVIGSAK PYSSSLGGGD AAFGLLFVAV FVGAAVGLAG APKLARRLPH ERLFGVGIVA
AGLTLVVVAL APHLAVALVA VALVGACAGA AFLTGITIIG SQIDDSIRGR INAIYQSLMK
IIIFGTTSAV PGLIGLVKPR RVTVWGNQII IDGTRPVLLA GGLLAALVGV IAYRQMDSRR
AEPIFADLRN VIRRPRRENG LLIVLEGTTA ADTAAQAAHL AQWLGSGSQR VVLAADPALD
DERLTSLMSG AALTGARAKA LAAAAVRADI VERNVRPALD EGAIVVMERF VDTPLAHLSA
MAGLDATELE GLTDWATGAL RPDLTVLLDA DPGEASEQST STAEHHWRVQ EILAEMAASA
PDRYVVVDAE GTEAEVAERV RVSVSEALSG KVALPPTTQE VA
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