| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35460 |
|---|
| Symbol | |
|---|
| ID | 8388867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3865651 |
|---|
| End bp | 3866955 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644977563 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135331 |
|---|
| Protein GI | 257057499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.329071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGC CCGAGCTTGT GCGCCAGGTC AAGGCCGGTA ACTCGACCGG ATGGGAGAGC
GGTGTCCAGG TCGCGCAGCA GTTGGCCGAA AGCCACATCG AGATCAGTGA TCGTGGTCGT
CGGGCGTTGA CCGTGTTGGA GAGCGCGTGG ACCGGTGGTG GTGCCGAGGC CGCGCAAGCC
AGGATCAAGC CCGCCATCGA GGCGACGTAC GAGGCTTCGA ACACCTATGA GGGCAACGCG
CGGACATTGG CTGACGGCGC CTCCACCTTC GACCAACTCA AATCCGCGTT GATACCCATG
CCCGACGCGC CGCCGACCCG CAACTTCTAC GACAAGATCA CTCCTTGGGA CACCGACACC
GAGGACGCCA TCAACGAGTT CAAGCACCTC GAAGAGCAGA ACCGGCGCAT CTACGAAAGC
TACGAACAGA GCACCCGGTC GATGTCCCAG CAGATACGCA TCGACTACGG GCAGCTCGAC
GACGAGTTCG ACACCGACCT CGCCATCGCC GAAGACGACT CGGCGGGTAA GGGCAAGGGC
ACGGGCACCA TCACGTTCCA CGAATCCGGT GGTGCACAGG GGACGACCGG TCCCGGTTTC
TCCGGCGGCG TGGGCTCCGG GGGCGGCGGC TTCTCCCCAC CGCCTTCCGT GCCCGCCGCC
TCGGGCTCCG GGGGCGGCAC CTTGACGCCC ACCCCGTCGC CGTCCGGCGG GTCGAGCACG
TCGCTTTCAG GCTTCCAACC GCCGACCGAC ACACCACCCT CCTACCGCCC CGGCGGCTAC
CAGCCTCCCT CCTTCGCCCC CGGACAAGCA GGAACACCCG GCGGTCCGGG CACGCCCGGC
GGCTTCGGCC CAGTCGGCGG CTTCGGGCCG GCGGGTGGTT TCGGGCCGAC GGGCGGTGGC
TTCGGCCCCG GCGGTGGTGC CGGTGCGGGT GGCTTCAGGC CCGGCGGTTT CGGACCCACC
GGTGGTGCCG GGGGCGTCGG AGGTGCCGGA GGTGCCGGAG GTCCCGGTGG CGCCGTGGCG
GGGCCGGGCA GGGGCACCGG TGTCGCGCCG TTCGGACCGG GCGCCCAGGC CGGCCCACAG
CCTGTGGGAC AACCCGGTGC GGGCGCGGCC GGACGTCCCG GAGCGATGCC GATGGGCGCC
ATGGGCGGCG GAGCCGGTCG CGGACAAGGC AGCGAGGATC AGGAACACAA GCGCAACTAC
GTGCAGGCCA CCGACGAGGT GTTCTCCCTC GTCGACGAAC AGGGCGAGAA GCTGCGCGAC
CCCGAGACCG GGCACCTGAT CGCCCCACCG ACCATCGGCG GGTAG
|
|---|
| Protein sequence | MPLPELVRQV KAGNSTGWES GVQVAQQLAE SHIEISDRGR RALTVLESAW TGGGAEAAQA
RIKPAIEATY EASNTYEGNA RTLADGASTF DQLKSALIPM PDAPPTRNFY DKITPWDTDT
EDAINEFKHL EEQNRRIYES YEQSTRSMSQ QIRIDYGQLD DEFDTDLAIA EDDSAGKGKG
TGTITFHESG GAQGTTGPGF SGGVGSGGGG FSPPPSVPAA SGSGGGTLTP TPSPSGGSST
SLSGFQPPTD TPPSYRPGGY QPPSFAPGQA GTPGGPGTPG GFGPVGGFGP AGGFGPTGGG
FGPGGGAGAG GFRPGGFGPT GGAGGVGGAG GAGGPGGAVA GPGRGTGVAP FGPGAQAGPQ
PVGQPGAGAA GRPGAMPMGA MGGGAGRGQG SEDQEHKRNY VQATDEVFSL VDEQGEKLRD
PETGHLIAPP TIGG
|
|---|
| |