Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_35330 |
Symbol | |
ID | 8388854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3848747 |
End bp | 3849628 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977550 |
Product | A/G-specific DNA glycosylase |
Protein accession | YP_003135318 |
Protein GI | 257057486 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.12933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.479068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATAG ACCCCCAGAC ACTGCTCGAC TGGTTCGACG CCAACGCGCG GGACCTGCCG TGGCGCCACG CCGACTGCAC CCCATGGGGC GTGCTCGTCA GCGAGATCAT GCTGCAACAG ACCCCCGTGG CCAGGGTGCT GCCGGTGTGG CGGCAGTGGA TGGAACGCTG GCCGAAACCG GCCGATCTCG CGGCGGCCTC CCAGGGCGAG GTGCTACGGG CGTGGGGCAA ACTCGGCTAC CCACGACGGG CGCTGCGGCT GCACACCGCC GCCAACACCA TCGTCGCCGA ACACGGGGGT GAGGTGCCCG CCGACGTCGA CACACTGTTG AGCCTGCCCG GCATCGGCGC GTACACCGCG CGAGCGGTGG CCGCCTTCGC CTACGGCAGG CGTGCACCCG TGGTGGACAC CAACGTTCGT AGGGTGGTTG CCAGAGCCGT CCACGGGGCC GCCGAAGCCG GTCCGCCCTC GACCAAGCGG GACCTCGACG ACGTGGAGGC GTTGCTGCCG GACGGCCCCG ACGAAGCCCG TGCCGCACGG TTCTCAGCGG CGTTGATGGA ACTCGGCGCA CTGGTGTGCA TAGCCCGCAA ACCACGGTGC GACGACTGTC CGCTGTTCGC CGACTGCGCC TGGCAGAAGG CGGGCCGACC TGCGTATACG GGCCCCACCA GGCCCACGCA ACGCTACAGC GGCACCGACC GACACGTGCG TGGTCTGCTA CTCGACGTGC TCCGTGGCAC CACCGGTCCG GTGGAGAAGG CACAGCTCGA TCTCGCTTGG CCGAAGGCGG GACAACGCGA CGCGTGCCTG GCCTCGTTGC TCAGTGACGG ATTGGTGGAG CAAACGGCTG ATGGACGGTT CGCCCTACCC GGCGAGCATT GA
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Protein sequence | MSIDPQTLLD WFDANARDLP WRHADCTPWG VLVSEIMLQQ TPVARVLPVW RQWMERWPKP ADLAAASQGE VLRAWGKLGY PRRALRLHTA ANTIVAEHGG EVPADVDTLL SLPGIGAYTA RAVAAFAYGR RAPVVDTNVR RVVARAVHGA AEAGPPSTKR DLDDVEALLP DGPDEARAAR FSAALMELGA LVCIARKPRC DDCPLFADCA WQKAGRPAYT GPTRPTQRYS GTDRHVRGLL LDVLRGTTGP VEKAQLDLAW PKAGQRDACL ASLLSDGLVE QTADGRFALP GEH
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