Gene Svir_34720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34720 
Symbol 
ID8388794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3775819 
End bp3776508 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID644977492 
Producthypothetical protein 
Protein accessionYP_003135261 
Protein GI257057429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.105852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACG GTTCCGCGAG CGATGGCCGG CGAGAGTCAC TGGCCACCCT GCTCGGCGGT 
CGGCGAGGCG CCGTGGACGC GAGCCTGCCG CCCGTCGCGT TCGTCGGGGG ATGGCTCGCC
GGTGGTTCGT CCATCGGCTG GGGCGCAGTG GCCGCTATCG CGGTGAGTGT AATGGCCGGC
GTGATCCGCA CGGCTCGGGG TGGCAAGCCC CGCGCCGTAC TGATCAGCCT GGCCGCCGTG
GTCGTGGCGG CGCTCATAGC GATGTACACC GGCAGGCCGG AGGACTTCTT CCTGCCGCAA
CTGTTGTCCA ACGTCGCGAG CGCGCTCGTG TGGGCTGCGA GCATCGTGGT GCGATGGCCG
CTGCTCGGGG TCGTCGTAGG ACTGCTGCTG GGACAGAAGA CCCGCTGGCG TGCCGACTCC
GACCTGGTAC GCGCCTATTC ACGGGCGAGT TGGGTGTGGG TGTGCCAATA CACCATCCGG
GTGGTCGTGT TCGGCGCGCT GTGGGTGTCG GGCAACGTGG TCGCGTTGGG CGTGGCGCGT
GTGGCGCTGT CGTGGCCGCT GGTGGTGGCG ACCATCGCGG TGAGCGGTTG GGTGCTGTAC
CGGTGCCTTC CCGACGAGCA CCCGGGCCTG CGGCAGCCGC GGCCCGGGTG CTCGAGCTCG
GCTGAAGCGG CGCGATCCCG CGGGCGGTGA
 
Protein sequence
MSDGSASDGR RESLATLLGG RRGAVDASLP PVAFVGGWLA GGSSIGWGAV AAIAVSVMAG 
VIRTARGGKP RAVLISLAAV VVAALIAMYT GRPEDFFLPQ LLSNVASALV WAASIVVRWP
LLGVVVGLLL GQKTRWRADS DLVRAYSRAS WVWVCQYTIR VVVFGALWVS GNVVALGVAR
VALSWPLVVA TIAVSGWVLY RCLPDEHPGL RQPRPGCSSS AEAARSRGR