| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34340 |
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| Symbol | |
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| ID | 8388758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3737071 |
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| End bp | 3739710 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977456 |
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| Product | nitrate/nitrite-sensing histidine kinase with HAMP domain protein |
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| Protein accession | YP_003135225 |
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| Protein GI | 257057393 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCGTC GCGGTAAACG TCCCGATAAG GGCGATGCGG CGATCGTCGG CTCCGCGGGG
GGCCGATGGC GAGTCCGTAA CTGGCGGTTG CGCACCAAGC TGGTGGCGAT GCTGCTCATT
CCCTCGGTGG CGGTGTTGGT GCTCGTCACG TTGCGGGCCA CCGACGATCT CGACCGGGCG
AGGACGTTCG CGGAACGGGC CGAGCAGGTA CGGGTCGAGA CCACGGTCGT CGAGATGGTG
CATCGACTCC AACGGGAACG GGACCTCGCC GTCCGCTACG TCGCAGAGGG GCGGAAGGAC
TCGCTCGCCG AGCTCAAGAA GCAGCGAGCG GAGGTCGATT CGGCCGTCGG GGCGTTCGAC
CGGGCGTTGA ACAGGTCGGA GCACGCGCTC TCGCCCGGCA CGTACCGGGC GTTCGAGCGG
ATCCACGACG AGCTCGACAT GCTGACCGGG CTGCGGTACG CCTCCGAGAA CACCGCGGTG
CCCCCGGAGG CGGTGCTTCG GTCGTACAGC GAACTCATCT CGGAGGTCAT GGGGGTCGGC
GAGGCGTTCG TGTCCAACGC CGTCGACAAC GAACTGGCCA GCAGCCGGTT GGCCGCCAAC
GCGCTGGCGA GGGTGAAGAA CCAGATGTCG ATCAGACGTG CGGTGGTGGC GCAGGCCTTG
GCCCAGGGCC GACTGTCGGA CGACACCGAA CGCGCGCTGT TGGCCGCCGA GGCGCAACTG
GACGCGGCGC GGGAGGAGTT CATGTCCCTG GCCCCCCCGC GACAGCAGCG CATGTACACC
GACACGGTGA TCGGGCTCGT GGTGGATCTC GGCAACGGCA TCGTGGAGTC CGTGCTGACC
CGCGCCGAGA ACGGCGGCAC GTTCGACGGG ATCTCCGCCG AGGAGTGGGA CACCTCGTCC
ACCTACACCA TCAACCTGGT CCGCAAGGTC CAGGACGCGA TACTGGCGGA ACTGCAGAAA
CGGGCGGACG ATCTCGCCGC CGACGCGCGG CGCTCGGCCG GGACCGATGC CGGCGTGGTC
CTGGGTGCGT TGCTGTTCGC GGCGATCCTC GCCGTGGTGA TCACCCGGTC GTTGCTGCGG
CCGTTGCGGA CTCTGCGCCG CTCCGCGCTC GACGTCGCGG AGCACAAACT GCCCGCGGCG
GTGGAGGACA TCCTCACCGA GGAACACCCC ACCCCCGAGT ACATCTACAC ACGCCCCGTC
GAGCGGGTAC CGGTCTACAC ACGGGACGAA CTCGGTGAGG TGGCGAGGGC GTTCGACGCC
GTACACGGCG AAGCGGTGCG GCTGGCCGGT GAGCAGGCCA TGTTGCGGGA GAACGTCAAC
GCGATGTTCG TGAACCTCTC CCGGCGCAGC CAGGACCTGG TGGAACGTCA GCTGTCCGTA
CTCGACCGCA TGGAGGAGCA CGAGCAGGAC CCGGACATCC TGGGCGGCTT GTACGAACTC
GACCACTTGG CCACCCGGAT GCGTCGCAAC AGCGAGAACC TGTTGGTGCT CGCGGGGGAG
GACGCCGCGA GATCGTTGCC GGGGTCCGTA CCCGCCTCCG AGATCATCGG CGCGGCTTTG
TCCGAAGTGG AGCATTACCA GCGTGTCTCG GTGCAGACGC CGCCTGAGCT GTCCGTCCAC
GGTGACGCGG CGGCCGACCT CATTCACGTG ATCGCGGAGC TGCTCGAGAA CGCGACCGCC
TACTCGCCGG AATCGGAACC GGTGAAGGTC GTCAGCTCGA TGACGAAAGA ACGACACTGG
CGCATCAAGA TCATCGACCG CGGTGCCGGT ATGCCGTGTA CGGAGATCCA GCGGGCGAAC
GCGCGACTGG CGAATCCGCC CGAGGTGGAC GTCGAGGTGT CACGGCGGAT GGGGCTGTAC
GTGGTCGGCA AACTGTCGGC CAGACACAAC ATCCGGGTCC GGCTCGAAGC GGCCGAGCTG
CGTGGACTCA CCGCGACCGT GCTCGTACCC GCGGAGCTCG TGGAGTACAA CACGCCCGAG
CACATCGAAC TCCCCGCACC CTCGACGTCG ACCCCGACAC CGATGCCGGA CGCCCCCGAC
ACCGAGTTCA TCTCCTCGCC CGACTCCCCG CGGGCCTGGG ACACCGGTGT CGACACCGAG
GACGGGATCG ATGGGGCACG ACCCGTCGTC GACGAAGCAC CCGAGCCGGA GCCGTCACCC
TCGATCGGCA GCGTGCTCGA CGCTGAAGAG CCCGCACCCG AACGGCCACG GAGAACGACG
GTCGAATTGG GTGCGCAACC GGCGTGGCCG ACCGAGGACG ACGACGAGAA GCACCCACCG
GCTTTAGAGG AAGAGGTCCC CACCGACCGG TTGCCCGCGT ATCAGGCGTT GCTGTCCAGA
TGGTTCCCCG ATGAGGTCAC CCCGCGCGCG GAGGACGTGG TGTGGCCGGA GGACCCGGAC
GAACCGGCCG ACACCGGTGT CGACGCCGTG CGAGGGGCGA CGACCGGACC GTCGATCGCG
TCGGCATTGT CCGAAGAAGA CAAAGACACC GTGCCCAGGC GGCATCCGCC CAGACACGGT
GTCGTCGATC GTCGTGGAGA ACGCCCGCCA CCCGTCAACC GCTCCCCGGA AGCGGTGCGG
GAGCGGATGA CGAGTCTACA GCGGGGCGTG CAGCGGGGTC GTCACGCGCG TACCGAGTGA
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| Protein sequence | MTRRGKRPDK GDAAIVGSAG GRWRVRNWRL RTKLVAMLLI PSVAVLVLVT LRATDDLDRA
RTFAERAEQV RVETTVVEMV HRLQRERDLA VRYVAEGRKD SLAELKKQRA EVDSAVGAFD
RALNRSEHAL SPGTYRAFER IHDELDMLTG LRYASENTAV PPEAVLRSYS ELISEVMGVG
EAFVSNAVDN ELASSRLAAN ALARVKNQMS IRRAVVAQAL AQGRLSDDTE RALLAAEAQL
DAAREEFMSL APPRQQRMYT DTVIGLVVDL GNGIVESVLT RAENGGTFDG ISAEEWDTSS
TYTINLVRKV QDAILAELQK RADDLAADAR RSAGTDAGVV LGALLFAAIL AVVITRSLLR
PLRTLRRSAL DVAEHKLPAA VEDILTEEHP TPEYIYTRPV ERVPVYTRDE LGEVARAFDA
VHGEAVRLAG EQAMLRENVN AMFVNLSRRS QDLVERQLSV LDRMEEHEQD PDILGGLYEL
DHLATRMRRN SENLLVLAGE DAARSLPGSV PASEIIGAAL SEVEHYQRVS VQTPPELSVH
GDAAADLIHV IAELLENATA YSPESEPVKV VSSMTKERHW RIKIIDRGAG MPCTEIQRAN
ARLANPPEVD VEVSRRMGLY VVGKLSARHN IRVRLEAAEL RGLTATVLVP AELVEYNTPE
HIELPAPSTS TPTPMPDAPD TEFISSPDSP RAWDTGVDTE DGIDGARPVV DEAPEPEPSP
SIGSVLDAEE PAPERPRRTT VELGAQPAWP TEDDDEKHPP ALEEEVPTDR LPAYQALLSR
WFPDEVTPRA EDVVWPEDPD EPADTGVDAV RGATTGPSIA SALSEEDKDT VPRRHPPRHG
VVDRRGERPP PVNRSPEAVR ERMTSLQRGV QRGRHARTE
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