Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34260 |
Symbol | |
ID | 8388750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3727716 |
End bp | 3728303 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977448 |
Product | predicted GTPase |
Protein accession | YP_003135217 |
Protein GI | 257057385 |
COG category | [R] General function prediction only |
COG ID | [COG2229] Predicted GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.63353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGCTG CCACGCCGGC GACGTCAGGC CCGACCCAGT CGGCCAAGAT CGTGGTCGCC GGTGGTTTCG GTGTCGGTAA GACAACGCTC GTGGGAGCGG TGTCCGAGAT CGACCCGCTG ACCACCGAGG CGTCCATGAC CGAGGCGAGC GTCTCTGTCG ACGACCTGTC GCAGACGCCG AACAAGATGA CCACCACGGT CGCGATGGAC TTCGGCAGGA TCACGCTCGA CTCCGACCTG GTCCTCTACA TTTTCGGCAC CCCGGGACAG CACCGGTTCT GGTTCATGTG GGACGACCTC GCCTACGGTG CGATCGGTGC CGTGGTGCTG GTGGACACCA GGAGATTGGC CGACGCGTTC CCGTCGATCG ACTTCTTCGA GAACCGCAGG CTGCCCTACA TCGTGGCGAT CAACTGCTTC GACCGACTGC TGCACCACCA GATCGAGGAC GTGCGGCACG CGCTCACCAT CTCGCCGTCG GTGCCGATCA TGGCCTGTGA CGCGCGGGAT CGCGAGTCCG CCAAGCAGGT GCTCATCTCC ATCGTGCAGC ACGCGATCGC CCACGACACG GCATTGCGGG CGGGGTGA
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Protein sequence | MSAATPATSG PTQSAKIVVA GGFGVGKTTL VGAVSEIDPL TTEASMTEAS VSVDDLSQTP NKMTTTVAMD FGRITLDSDL VLYIFGTPGQ HRFWFMWDDL AYGAIGAVVL VDTRRLADAF PSIDFFENRR LPYIVAINCF DRLLHHQIED VRHALTISPS VPIMACDARD RESAKQVLIS IVQHAIAHDT ALRAG
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